New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2987692 = | NA (NA) | 5 (0.110) | 5/254 | NT | NA | coding (707/2991 nt) | PP_2612 | membrane protein |
? | NC_002947 | 2987745 = | NA (NA) | coding (654/2991 nt) | PP_2612 | membrane protein |
TCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGG > NC_002947/2987711‑2987858 | tctgCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTgg < 4:217147/145‑1 (MQ=1) | TCGGCTGGGTCCAGGGGTAGTGCCGGGCGATGGCATGGAGGTTGCCGATGGGCAAGGTTTCGGTGACCGGGTCGCTGCTCCAGGTCAGCGGCATGCGCCGCTCGGTTGGCTTGAAGTCTTCGACCCAGGTTTGCAGGGCACTCACTGG > NC_002947/2987711‑2987858 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |