| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3437048 = | 56 (1.140) | 3 (0.070) | 3/242 | NT | 6.0% | coding (174/879 nt) | PP_3056 | tail fiber protein |
| ? | NC_002947 | 3437092 = | 42 (0.930) | coding (218/879 nt) | PP_3056 | tail fiber protein | |||||
GCCGGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3437203‑3437048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcaccgccaTCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCCTACGACCT > NC_002947/3437092‑3437233 gaCGGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTC > 2:157537/3‑149GCCGGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCCCCAACAGCGTGCCATCGGCTAACAGAAAGCACATTTCACACACCCAGAACGCGGCAGGGCCATAAGCGATGGCGGTGAGGTGAATCAGTCTGTCACTAAGCCGCT > 1:126826/1‑148 CCGGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCA > 1:303719/1‑149 GGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACC < 8:258596/149‑1 CTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGC < 4:218758/149‑1 GTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCA < 1:140061/148‑1 GTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCA < 1:90974/148‑1 CGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCA > 1:47760/1‑131 CGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCA < 2:47760/131‑1 GCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAG > 3:249436/1‑149 CGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTT > 1:142556/1‑108 CGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTT < 2:142556/108‑1 CTCACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGCTGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGCCCTACAAGCCGCCCAAGACCGACTTGCTGATGGCCTACGA > 7:212286/1‑149 CACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCCTACGACC < 4:239233/149‑1 ACCGCCATCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCCTACGACCT < 3:166617/149‑1 GCCGGCTTGTAGGTCAGAGCGTCAGTCGCATGCGACCAAACCGCCAACAGCGTGCCATCGGCTAACAGAAAGCCGATTTCACGCACCCAGAACGCGGCCGGGCCATCAGCGATGGCGGTGAGGTGAATCAGGCTGTCACTCAGCCGCTCACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3437203‑3437048‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcaccgccaTCGCTGATGGCCCGGCCGCGTTCTGGGTGCGTGAAATCGGCTTTCTGTTAGCCGATGGCACGCTGTTGGCGGTTTGGTCGCATGCGACTGACGCTCTGACCTACAAGCCGGCCAATACCGACTTGCTGTTGGCCTACGACCT > NC_002947/3437092‑3437233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |