New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3910391 = | 52 (1.060) | 3 (0.060) | 3/250 | NT | 5.7% | coding (2340/2640 nt) | PP_3450 | TPR repeat‑containing protein |
? | NC_002947 | 3910458 = | 49 (1.050) | coding (2407/2640 nt) | PP_3450 | TPR repeat‑containing protein |
GCCAACCCCGGCGCGGGCGTCCTGGCGCCAGTCGTTGCTGGGGTCCTGGCTGGAGAACTCGACAAAGCCGTAGGGCATGAGGGTTTGCGGCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3910544‑3910391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGGGTTGGCGTGCGCTGGCAATGGTGGTTCGACGACGACCGCTACAACGCCTACCGCGGCTCGCTGA > NC_002947/3910458‑3910602 GCCAACCCCGGCGCGGGCGTCCTGGCGCCAGTCGTTGGTGGGGTCCTGGCTGGAGAACTCGACAAAGCCGTAGGGCATGAGGGTTTGCGGCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGT > 6:217457/1‑149 GGCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGTCGCCGCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGGGT > 2:155329/1‑149 GCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGTCGCCGCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGG > 7:48312/1‑146 GCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGTCGCCGCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGG < 8:48312/146‑1 CCGCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGGGTTGGCGTGCGCTGGCAATGGTGGTTCGACGACGACCGCTACAACGCCTACCGCGGCTCGCTGA > 5:268479/1‑148 GCCAACCCCGGCGCGGGCGTCCTGGCGCCAGTCGTTGCTGGGGTCCTGGCTGGAGAACTCGACAAAGCCGTAGGGCATGAGGGTTTGCGGCGAGCTGCCCGGCAGCTTCCAGGCGTGGCCCTGCTGGTAGCGCGACAGCCAGGCATGGTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3910544‑3910391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccgCAAACCCTCATGCCCTACGGCTTTGTCGAGTTCTCCAGCCAGGACCCCAGCAACGACTGGCGCCAGGACGCCCGCGCCGGGGTTGGCGTGCGCTGGCAATGGTGGTTCGACGACGACCGCTACAACGCCTACCGCGGCTCGCTGA > NC_002947/3910458‑3910602 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |