New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4131117	45 (0.920)	5 (0.110)	4/250	NT	9.9%	intergenic (+29/+83)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131165	48 (1.030)					intergenic (+77/+35)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease

CTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4130965‑4131117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATC  <  NC_002947/4131165‑4131020                                                                                                                                                                                                                                                                                                              CTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGC                                                                                                                                                        >  8:280989/1‑149               AGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGCCCGCTCCCACAGG                                                                                                                                           >  5:221403/1‑148                                                       CGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGC                                                                                                  <  6:221403/149‑1                                                                    GATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTCGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCG                                                                                       <  2:14624/147‑1                                                                                  TCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCCGGATGGCCTGTTCGCGGGCTTGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG                                                                                                >  1:67247/1‑125                                                                                  TCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGG                                                                                                <  2:67247/124‑1                                                                                                                                                     GCCCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCT      >  5:224145/1‑148                                                                                                                                                       CCGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCCCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCA    >  5:181691/1‑148                                                                                                                                                        CGCTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATC  >  1:64506/1‑149                                                                                                                                                                                                                                                                                                              CTATCTGCTTAACCAGCAGGGTGAGGATGCAATGATCGAAGCGGAGCAGATGCGCGATGAGCGGCTGGATGAGCTGACCGCTCAAGCCCAGGAATGTGTGCGCCAGCGCAAGAACGTGCATTGATCC‑GATGGCCTGTTCGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4130965‑4131117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTCCCACAGGTACATCACCGGCCTTGGGCCTTACGGTATTCCTGTGGGCGCGGGCAAGCCCGCGAACAGGCCATCGGATCAATGCACGTTCTTGCGCTGGCGCACACATTCCTGGGCTTGAGCGGTCAGCTCATCCAGCCGCTCATC  <  NC_002947/4131165‑4131020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.