New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 438624642 (0.860)3 (0.060) 3/250 NT 6.6% coding (163/501 nt) PP_3862 assembly protein
?NC_002947 = 4386266 45 (0.960)coding (143/501 nt) PP_3862 assembly protein

CCATCTCGATGAGCCGACCACGCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4386096‑4386246
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCGGTGACCGCAGTCACGGCGTGGTGCTGGTGGTGTCGGATCGGCGGTACCGCCTGCCCGGCCTGCAGGGCGGTGAAGTGGCCTTGTACACCGACGAAGGCGACCGGGTTGTGCT  <  NC_002947/4386266‑4386122
                                                                                                                                                                                                                                                                                                        
CCATCTCGATGAGCCGACCACGCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCC                                                                                                                                                     >  6:276633/1‑149
                                   CGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCG                                                                                                                  <  1:277600/149‑1
                                        GCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCCGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCagatgg                                                                                                             >  5:267863/1‑143
                                        GCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGCTTGAAGGCGCCGAGGCCTTGGCGGGCTTTAT                                                                                                                    <  6:267863/142‑1
                                                                                                                                                 GCCCGCTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCGGTGACCGCAGTCACGGCGTGGTGCTGGTGGTGTCGGATCGGCGGTACCGCCTGCCCGGCCTGCAGGGCGGTGAAGTGGCCTTGTACACCGACGAAGGCGACCGGGTTGTG    >  1:219972/1‑149
                                                                                                                                                    CGCTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCGGTGACCGCAGTCACGGCGTGGTGCTGGTGGTGTCGGATCGGCGGTACCGCCTGCCCGGCCTGCAGGGCGGTGAAGTGGCCTTGTACACCGACGAAGGCGACCGGGTTGTGCT  >  5:61750/1‑148
                                                                                                                                                                                                                                                                                                        
CCATCTCGATGAGCCGACCACGCTTGAGCACAACCCGGTCGCCTTCGTCGGTGTACAAGGCCACTTCACCGCCCTGCAGGCCGGGCAGGCGGTACCGCCGATCCGACACCACCAGCACCACGCCGTGACTGCGGTCACCGATAAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4386096‑4386246
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcTTGAAGGCGCCGAGGCCTTGGCGGGCTTTATCGGTGACCGCAGTCACGGCGTGGTGCTGGTGGTGTCGGATCGGCGGTACCGCCTGCCCGGCCTGCAGGGCGGTGAAGTGGCCTTGTACACCGACGAAGGCGACCGGGTTGTGCT  <  NC_002947/4386266‑4386122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.