New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4480540 =	31 (0.630)	4 (0.080)	4/256	NT	11.5%	coding (409/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	4480597 =	31 (0.650)					coding (466/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase

ATCGCGGGCTGCGAGCACCAAGCGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4480602‑4480540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTG  >  NC_002947/4480597‑4480704                                                                                                                                                                             ATCGCGGGCTGCGAGCACCAAGCGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCA                        >  4:264020/1‑149  TCGCGGGCTGCGAGCACCAAGCGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCAC                       >  5:47248/1‑149       GGCTGCGAGCACCAAGCGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGA                  >  4:279559/1‑149                       CGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCCCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTG  <  6:47248/149‑1                                                                                                                                                                             ATCGCGGGCTGCGAGCACCAAGCGTGCGCCTTTGCAGGCAAAGGCGTGCGCGGCGGCGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4480602‑4480540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGCGATGAAGAAGCATTATTTGACGTTCTGGATGAATGCACCGATTGTGGTACGGATGCCATAGCGGTCACCACCGACGTCACCCACAGCGACCAGGTTCAAGCGCTG  >  NC_002947/4480597‑4480704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.