| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4594949 = | 45 (0.920) | 3 (0.060) | 3/254 | NT | 6.2% | coding (165/300 nt) | PP_4069 | hypothetical protein |
| ? | NC_002947 | 4594981 = | 47 (0.990) | coding (197/300 nt) | PP_4069 | hypothetical protein | |||||
GTCTATAAACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4595098‑4594949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCGGGTTTA > NC_002947/4594981‑4595093 GTCTATAAACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGC < 2:235220/147‑1GTCTATAAACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGC < 5:304345/147‑1 ACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCA > 2:25088/1‑140 ACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTACCTGGGCGGTGGCCGCAGCGCAGCGCAGCA < 1:25088/140‑1 GGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACC < 1:80575/135‑1 GGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACC > 2:80575/1‑135 TTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCGGGTGTA > 4:34793/1‑148 GTCTATAAACCCGGTCACTCGGTGTGTTTGTGCTCCAGCAGTGCGCGAGCCATGTCCATCATGTGCATCAACGCGAACGTCAGTTCGCGCTGGCTGCCGTGCTGGTGGGTGGCGGTTTCCTGGGCGGTGGCCGCAGCGCAGCGCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4595098‑4594949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCGGGTTTA > NC_002947/4594981‑4595093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |