New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4594949 =	45 (0.920)	3 (0.060)	3/254	NT	6.2%	coding (165/300 nt)	PP_4069	hypothetical protein
	?	NC_002947	4594981 =	47 (0.990)					coding (197/300 nt)	PP_4069	hypothetical protein

ACGACGAAACAGATCTCGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCGG  >  NC_002947/4594801‑4595088                                                                                                                                                     |                                                                                                                                            acgactAAACAGATCTCGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGcc                                                                                                                                             <  8:285805/149‑1 (MQ=255)   gacgaAACAGATCTCGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCct                                                                                                                                           >  3:236564/1‑149 (MQ=255)            gATCTCGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTgctgcgctg                                                                                                                                  >  3:137141/1‑149 (MQ=255)                tcGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCAGGACAACAGGAACTGGACCCTGCACGAAGGCGGAACCGGCGAACAGGCCCAAGAACACGCCATCGCCCAgcggagctgcgcg                                                                                                                              >  2:274897/1‑148 (MQ=255)                      gCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGcc                                                                                                                        >  5:65177/1‑149 (MQ=255)                             cgcccgccGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGccc                                                                                                                 <  4:236564/149‑1 (MQ=255)                               cccgccGCGCGCTCGACTATTACCTCAACCCCGACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAg                                                                                                               <  2:105548/149‑1 (MQ=255)                                    tacacccggtcactcggtgtgtttgtgctccagcagtgcgcgagccatgtccatcatgtgcatcaacgcgaacgtcagttcgcgctggctgccgtgctggtgggtggcggtttCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGaaa                                                                                                           >  4:34793‑M1/114‑148 (MQ=255)                                    cgcgcgCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCAGGACCCTGCACCAAGGCGTAACCGGCGCACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAAc                                                                                                          >  4:31700/1‑149 (MQ=255)                                             gACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGCACAGGCCAAGGAACACGCCATCGCCCTGCAGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGccccccc                                                                                                 >  6:26523/1‑148 (MQ=255)                                                   ggtgtgtttgtgctccagcagtgcgcgagccatgtccatcatgtgcatcaacgcgaacgtcagttcgcgctggctgccgtgctggtgggtggcggtttCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAAcc                                                                                                         >  2:80575‑M1/99‑135 (MQ=255)                                                   ggtgtgtttgtgctccagcagtgcgcgagccatgtccatcatgtgcatcaacgcgaacgtcagttcgcgctggctgccgtgctggtgggtggcggtttCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAAcc                                                                                                         <  1:80575‑M1/37‑1 (MQ=255)                                                     ccTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACg                                                                                         <  6:65177/149‑1 (MQ=255)                                                     ccTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACg                                                                                         >  3:66038/1‑149 (MQ=255)                                                     ccTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACg                                                                                         >  2:257634/1‑149 (MQ=255)                                                      cTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCcacccacc                                                                                               >  7:189804/1‑142 (MQ=255)                                                      cTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCcacccacc                                                                                               <  8:189804/142‑1 (MQ=255)                                                      cTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACgg                                                                                        <  8:292012/149‑1 (MQ=255)                                                                  ccACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGcgcg                                                                             >  2:194652/1‑148 (MQ=255)                                                                     ccGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACAGCCAAGGAAACCGCCTCCCACCAGCACGGCAGCCAGCGCGaagt                                                                         >  6:297835/1‑147 (MQ=255)                                                                        cgGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGAc                                                                      <  5:26523/149‑1 (MQ=255)                                                                         ggCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACg                                                                     >  3:239907/1‑149 (MQ=255)                                                                          gCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGt                                                                    >  2:65050/1‑149 (MQ=255)                                                                               cccTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTcgcg                                                               >  2:248744/1‑149 (MQ=255)                                                                                    gACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTg                                                            <  1:65050/147‑1 (MQ=255)                                                                                     acaacaGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATg                                                         <  1:274897/149‑1 (MQ=255)                                                                                       aacaGGATCTGGACCCTGCACTAAGGCGTAACCGGCGAACAGGCAAAGGAACACGCCATCGCCCTTCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGca                                                       <  5:297835/149‑1 (MQ=255)                                                                                       aacaGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGca                                                       >  3:273285/1‑149 (MQ=255)                                                                                       aacaGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGca                                                       <  4:239907/149‑1 (MQ=255)                                                                                         caGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGcaca                                                     >  1:192831/1‑149 (MQ=255)                                                                                                  gACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACatgat                                                 <  3:232191/144‑1 (MQ=255)                                                                                                           cGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGcac                                                      >  2:146666/1‑130 (MQ=255)                                                                                                           cGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGcac                                                      <  1:146666/130‑1 (MQ=255)                                                                                                                     aCCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGa                         <  4:137141/149‑1 (MQ=255)                                                                                                                      ccGTCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAg                        <  7:257760/149‑1 (MQ=255)                                                                                                                      ccGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAg                        <  1:248744/149‑1 (MQ=255)                                                                                                                        ggCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAAc                                                                          >  4:205922/1‑97 (MQ=255)                                                                                                                        ggCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAAc                                                                          <  3:205922/97‑1 (MQ=255)                                                                                                                            aaCAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACaaa                  <  2:192831/149‑1 (MQ=255)                                                                                                                            aaCAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACaaa                  <  4:66038/149‑1 (MQ=255)                                                                                                                                 gCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGc                       >  8:151889/1‑139 (MQ=255)                                                                                                                                 gCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGc                       <  7:151889/139‑1 (MQ=255)                                                                                                                                  ccAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACAcc            >  2:220079/1‑149 (MQ=255)                                                                                                                                      ggAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGt        <  1:257634/149‑1 (MQ=255)                                                                                                                                       gAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGt        >  1:180751/1‑148 (MQ=255)                                                                                                                                        aaCACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACaaa                  >  6:312897/1‑137 (MQ=255)                                                                                                                                        aaCACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACaaa                  <  5:312897/137‑1 (MQ=255)                                                                                                                                         acacGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGAc                                             >  1:278984/1‑109 (MQ=255)                                                                                                                                         acacGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGAc                                             <  2:278984/109‑1 (MQ=255)                                                                                                                                            cGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCgg  <  1:194652/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                            ACGACGAAACAGATCTCGACAGCGAAGCCGCCCGCCGCGCGCTCGACTATTACCTCAACCCCAACCCACCGCGGCCCACCCTGGACAACAGGATCTGGACCCTGCACGAAGGCGTAACCGGCGAACAGGCCAAGGAACACGCCATCGCCCTGCTGCGCTGCGCTGCGGCCACCGCCCAGGAAACCGCCACCCACCAGCACGGCAGCCAGCGCGAACTGACGTTCGCGTTGATGCACATGATGGACATGGCTCGCGCACTGCTGGAGCACAAACACACCGAGTGACCGG  >  NC_002947/4594801‑4595088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.