| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4787374 = | 43 (0.880) | 4 (0.090) | 4/250 | NT | 9.1% | coding (6466/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4787413 = | 39 (0.840) | coding (6427/6525 nt) | pvdI | non‑ribosomal peptide synthetase | |||||
ACTTCTTTGAACTGGGTGGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4787526‑4787374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGA > NC_002947/4787413‑4787559 ACTTCTTTGAACTGGGTCGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGGCTCATCTTCGAAACACCGGTTCTGCTGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAG < 7:82897/149‑1 CTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGTCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGG < 7:200122/121‑1 CTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGG > 8:200122/1‑121 AAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGA > 2:240671/1‑149 CCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACC < 1:240671/149‑1 TTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGT > 2:48120/1‑149 GCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCA > 6:171580/1‑148 GGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCG > 2:117953/1‑147 GCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAG < 6:19640/149‑1 CCGCAGAACCGGTGGTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCGGACCTGCTCGATGCGCAGGA > 2:31822/1‑149 ACTTCTTTGAACTGGGTGGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4787526‑4787374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGA > NC_002947/4787413‑4787559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |