New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4787374 = | 43 (0.880) | 4 (0.090) | 4/250 | NT | 9.1% | coding (6466/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | 4787413 = | 39 (0.840) | coding (6427/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
GCTCATTTTTTCGACCACCTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAA > NC_002947/4787227‑4787521 | tcctgcgcatcgagcaggtccggctggacgacaacttctttgaactgggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaccaccggttctgcgg > 2:31822‑M1/148‑149 (MQ=255) ctgcgcatcgagcaggtcgggctggacgacaacttctttgaactgggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGc < 6:19640‑M1/4‑1 (MQ=255) aTTTTTTCGACCACCTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCt > 1:89231/1‑149 (MQ=255) cgcatcgagcaggtcgggctggacgacaacttctttgaactgggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGcc > 2:117953‑M1/143‑147 (MQ=255) ttCGACCACCTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGcc < 2:89231/148‑1 (MQ=255) accTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCtt > 4:100586/1‑149 (MQ=255) accTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCt > 8:182165/1‑148 (MQ=255) cggcgCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGACCTGGCCCGCGCCTTCCAgcg > 1:114938/1‑149 (MQ=255) ggcgCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAgcgc < 2:218346/149‑1 (MQ=255) ctCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGc > 4:49488/1‑148 (MQ=255) gCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGc > 5:176032/1‑149 (MQ=255) gCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGc < 2:73669/149‑1 (MQ=255) gCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCg < 2:106620/149‑1 (MQ=255) gCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCg > 8:111662/1‑149 (MQ=255) tgaactgggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGc > 6:171580‑M1/108‑148 (MQ=255) actgggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGaa > 2:48120‑M1/105‑149 (MQ=255) cTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGaa < 1:1506/148‑1 (MQ=255) cTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAAc > 5:266143/1‑149 (MQ=255) ggtggtcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCgg < 1:240671‑M1/49‑1 (MQ=255) aCGTATGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGtt > 4:8157/1‑149 (MQ=255) tcactcgctgctggcggcccaggccctctcacgtatcaacagccaactgggcatcgatatgccgatccgtctcatcttcgaaacaccggttctgcGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGttt > 2:240671‑M1/96‑149 (MQ=255) gTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTc < 8:222506/149‑1 (MQ=255) gCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCTGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGaa < 5:263907/147‑1 (MQ=255) gCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGaa < 3:100586/147‑1 (MQ=255) gCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGaa < 3:49488/147‑1 (MQ=255) tGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATc > 1:20015/1‑149 (MQ=255) cGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCg < 2:20015/148‑1 (MQ=255) gtcCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGAt < 3:8157/148‑1 (MQ=255) gtcCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATAGATg > 5:161807/1‑149 (MQ=255) tcCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGACTTCCAGCGCCTGGGCAAAGGCCCGCAGATCCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGc < 6:176032/149‑1 (MQ=255) cAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAg > 2:201160/1‑146 (MQ=255) cAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAg < 1:201160/146‑1 (MQ=255) aGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGc < 7:182165/149‑1 (MQ=255) gCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCt > 3:47040/1‑149 (MQ=255) cTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGt > 4:100310/1‑149 (MQ=255) aGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGtt < 6:266143/147‑1 (MQ=255) aGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGtt < 4:47040/147‑1 (MQ=255) cattcatCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTga < 6:161807/148‑1 (MQ=255) attcatCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTg < 4:242189/139‑1 (MQ=255) attcatCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTg > 3:242189/1‑139 (MQ=255) atcaGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGc > 5:19640/1‑149 (MQ=255) cGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGgccgc > 1:162050/1‑148 (MQ=255) gATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGgccgc > 6:288367/1‑147 (MQ=255) cGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCagcagc > 7:142382/1‑149 (MQ=255) cGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAg < 3:281057/149‑1 (MQ=255) cGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAg > 8:138350/1‑149 (MQ=255) gCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGac > 8:251975/1‑149 (MQ=255) cttcttCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGacca > 5:186198/1‑149 (MQ=255) cttcGGTCAGGGCCTAGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGaccac < 5:109378/147‑1 (MQ=255) cGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGATCACCCAGt > 8:246814/1‑149 (MQ=255) aGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGATCACCCAGTTCaaa < 7:246814/149‑1 (MQ=255) | GCTCATTTTTTCGACCACCTGGCGGCGCTGCTCCAGCGGCATTGCTACGAAACGTCTGGCGATGCGTTCTGCGGTTGTCTTGTCCATTTCAAGCCTCAGTCAATTCATTCATCAGTTGTTCGATACCGGCGAGGCCTTCTTCGGTCAGGGCCTGGCCCGCGCCTTCCAGCGCCTGGGCAAAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAA > NC_002947/4787227‑4787521 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |