New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4825882 = | 46 (0.940) | 3 (0.060) | 3/252 | NT | 6.4% | coding (5308/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4825929 = | 44 (0.940) | coding (5261/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CTGCACGTGGACGCCTTCGAGCGTGCGCTGCAGGCGCTGATCGTGCGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4825933‑4825882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAG > NC_002947/4825929‑4826074 CTGCACGTGGACGCCTTCGAGCGTGCGCTGCAGGCGCTGATCGTGCGCCACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCT < 3:281292/116‑1 CTGCACGTGGACGCCTTCGAGCGTGCGCTGCAGGCGCTGATCGTGCGCCACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCT > 4:281292/1‑116 CACGTGGACGCCTTCGAGCGTGCGCTGCAGGCGCTGATCGTGCGCCACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGA > 2:9244/1‑147 CCACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTG > 1:293291/1‑148 CCACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTG > 8:6932/1‑148 ACGTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAG < 5:237470/149‑1 CTGCACGTGGACGCCTTCGAGCGTGCGCTGCAGGCGCTGATCGTGCGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4825933‑4825882 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgTGCAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAG > NC_002947/4825929‑4826074 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |