New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4953460 =	45 (0.920)	3 (0.070)	3/246	NT	7.0%	coding (972/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4953515 =	37 (0.810)					coding (917/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator

GTATGCCTGATGGCTATCGCCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4953614‑4953460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgtcaTCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGAGC  >  NC_002947/4953515‑4953661                                                                                                                                                                                                                                                                                                                GTATGCCTGATGGCTATCGCCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTG                                                                                                                                                           >  6:109721/1‑149    TGCCTGATGGCTATCGCCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCT                                                                                                                                                         <  2:269759/148‑1        TGATGGCTATCGCCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGT                                                                                                                                                       >  6:173903/1‑146                    CCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCT                                                                                                                                                            <  5:175224/129‑1                    CCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCT                                                                                                                                                            >  6:175224/1‑129                                                                                         TGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGTCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCCCCGACAGGC                                                                   >  5:254700/1‑149                                                                                              GTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGTCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCA                                                                                                    <  5:277627/111‑1                                                                                              GTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGTCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCA                                                                                                    >  6:277627/1‑111                                                                                                                                                       TGTCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATT      >  1:306735/1‑148                                                                                                                                                         TCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGAG   <  4:79529/149‑1                                                                                                                                                         TCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGA    <  2:273239/148‑1                                                                                                                                                         TCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTG     <  2:4484/147‑1                                                                                                                                                         TCATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTG     <  5:180257/147‑1                                                                                                                                                           ATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGAGC  <  1:86793/148‑1                                                                                                                                                           ATCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGACAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGAG   >  8:197020/1‑147                                                                                                                                                                                                                                                                                                                GTATGCCTGATGGCTATCGCCTGTCGGTGGATGGCCAAGTGCTGTCGGCACTGAGTTCGCGGCACCTGCCGCTGGGCATTCTGGCCGCTGAGCGTTTCGATGACAGCACGGAGGTGTTGCCGCTGGCACCGGGCGAGCGCCTGTTGCTGCTGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4953614‑4953460 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgtcaTCGAAACGCTCAGCGGCCAGAATGCCCAGCGGCAGGTGCCGCGAACTCAGTGCCGACAGCACTTGGCCATCCACCGACAGGCGATAGCCATCAGGCATACCGCCATTCCACACCTCCACCGAGCCGCGCTGCATGCTGAGATTGAGC  >  NC_002947/4953515‑4953661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.