New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5221665 =	62 (1.270)	4 (0.090)	4/248	NT	7.1%	coding (791/888 nt)	PP_4601	LysR family transcriptional regulator
	?	NC_002947	5221749 =	46 (0.990)					coding (875/888 nt)	PP_4601	LysR family transcriptional regulator

TCAAGCAGCTGACCGGCTTTACGCCGCGCCAGTACCGCCAGGCTACCGCCGATCAGCTGGCCTGAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5221814‑5221665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctgtTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCTGCTTGAACTGGCGGCTGAAGGCGCTGTGGTCGGTGTAG  >  NC_002947/5221749‑5221846                                                                                                                                                                                                                                                          TCAAGCAGCTGACCGGCTTTACGCCGCGCCAGTACCGCCAGGCTACCGCCGATCAGCTGGCCTGAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTG                                                                                                     >  4:1620/1‑149              CGGCTTTACGCCGCGCCAGTACCGCCAGGCTACCGCCGATCAGCTGGCCTGAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGG                                                                                                        >  6:121378/1‑133                                                              CTGAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGTTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCT                                        >  1:69439/1‑149                                                                GAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGTTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCTGC                                      >  8:277324/1‑149                                                                                                   GCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGTTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCTGCTTGAACTGGCGGCTGAAGGCGCTGTGGTCGGTGTA   <  2:69439/149‑1                                                                                                    CAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGTTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCTGCTTGAACTGGCGGCTGAAGGCGCTGTGGTCGGTGTAG  <  7:277324/149‑1                                                                                                                                                                                                                                                          TCAAGCAGCTGACCGGCTTTACGCCGCGCCAGTACCGCCAGGCTACCGCCGATCAGCTGGCCTGAAACAGCCCCCGCGCCTCGGCAAAGCATTGCTCGGCAATCGCCGAGCGCGGCTCGCTGCGGCGCAGCAGCAGCCCGACCGGGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5221814‑5221665 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctgtTTCAGGCCAGCTGATCGGCGGTAGCCTGGCGGTACTGGCGCGGCGTAAAGCCGGTCAGCTGCTTGAACTGGCGGCTGAAGGCGCTGTGGTCGGTGTAG  >  NC_002947/5221749‑5221846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.