| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5248743 = | 49 (1.000) | 4 (0.090) | 4/252 | NT | 6.6% | intergenic (‑83/+173) | PP_4623/PP_4624 | hypothetical protein/alpha/beta family hydrolase |
| ? | NC_002947 | 5248789 = | 66 (1.400) | intergenic (‑129/+127) | PP_4623/PP_4624 | hypothetical protein/alpha/beta family hydrolase | |||||
TGGCAGCCAGGGTGCATGTTCAGACGCC‑AAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5248893‑5248743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGCTGCCAGGTGGCCGACGCCGAAGCCTCGTCATGACCACGCCACTTTCGG > NC_002947/5248789‑5248936 TGGCAGCCAGGGTGCATGTTCAGACGCCAAAAAAAAAGGCCGCTGCAAGCCGCAGCGGCAAATCGAGCCGTAAGAGCAAGGAGATTCAAAAAATACGTCGGTGAACATGGCCGGCTTGAAGGGCGGGGGGGAGAGCCCTTCACGCCGGC > 2:132059/1‑149TGGCAGCCAGGGTGCATGTTCAGACGCC‑AAAAAAAACGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGC > 8:40631/1‑148 AACCTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTT < 7:199962/126‑1 AACCTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTT > 8:199962/1‑126 CTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAGGTTCACCGACGTAGATTTTGAAGCTCC > 1:106369/1‑73 CTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAGGTTCACCGACGTAGATTTTGAAGCTCC < 2:106369/73‑1 GGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGCTGCCAGGTGGCCGACGCCGAAGCCTCGTCATGACCACGCCACTTTCGG < 3:114127/149‑1 TGGCAGCCAGGGTGCATGTTCAGACGCC‑AAAAAAAAGGCCGCTGCAAGCCGCAGCGGCCAATCGAGACGTCAGATCAAGGAGCTTCAAAATCTACGTCGGTGAACCTGGCAGGCTTGAAAGGCGGGGGGGAGAGCCCTTCAAGCCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5248893‑5248743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGCTGCCAGGTGGCCGACGCCGAAGCCTCGTCATGACCACGCCACTTTCGG > NC_002947/5248789‑5248936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |