New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5248743 =	49 (1.000)	4 (0.090)	4/252	NT	6.6%	intergenic (‑83/+173)	PP_4623/PP_4624	hypothetical protein/alpha/beta family hydrolase
	?	NC_002947	5248789 =	66 (1.400)					intergenic (‑129/+127)	PP_4623/PP_4624	hypothetical protein/alpha/beta family hydrolase

AAAATTACCGAAGCAGCAGAGTGAACGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGC  >  NC_002947/5248595‑5248888                                                                                                                                                     |                                                                                                                                                  ccgaaagtggcgtggtcatgacgaggcttcggcgtcggccacctggcagccagggtgcatgttcagacgccaaaaaaaaggccgctgcaagccgcagcggccaatcgagacgtcagatcaaggagcttcaaaatctacgtcggtgaacc                                                                                                                                                   <  3:114127‑M1/1‑1 (MQ=255)        ccGAAGCAGCAGAGTGAACGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCgg                                                                                                                                            <  8:853/149‑1 (MQ=255)        ccGAAGCAGCAGAGTGAACGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCgg                                                                                                                                            >  5:70342/1‑149 (MQ=255)                    agTGAACGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGctc                                                                                                                                <  1:86788/149‑1 (MQ=255)                         aCGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTcccc                                                                                                                           <  4:63416/149‑1 (MQ=255)                           ggATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTcccccc                                                                                                                         >  6:268702/1‑149 (MQ=255)                           ggATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTcccccc                                                                                                                         <  4:99716/149‑1 (MQ=255)                           ggATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCAGGCTTGAAGGGCTCTcccccc                                                                                                                         >  6:263985/1‑149 (MQ=255)                             atgatAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTGGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCg                                                                                                                       >  7:77973/1‑149 (MQ=255)                                 tAAAGGCAATAGCGCCGGGCAGCGTACCCAGCACTTTGCCCTGGTGCCTGATACGTAACGGGGAATGGCGACCTAAGCTATTTTTCCTGCCGGATCAAGCGCTTATTCTTGCCTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCtt                                                                                                                   <  2:240181/149‑1 (MQ=255)                                 tAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCtt                                                                                                                   >  2:225549/1‑149 (MQ=255)                                   aaGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCttt                                                                                                                  >  7:178539/1‑148 (MQ=255)                                    aGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTc                                                                                                                 >  1:185004/1‑148 (MQ=255)                                     ggCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTc                                                                                                                 >  2:31001/1‑147 (MQ=255)                                     ggCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCaa                                                                                                               <  5:36728/149‑1 (MQ=255)                                      gctaTAGCGCATGGAAGCCTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGGCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAg                                                                                                              <  1:106387/146‑1 (MQ=255)                                      gCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAg                                                                                                              >  4:175816/1‑149 (MQ=255)                                             cgcAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCa                                                                                                       <  5:114217/149‑1 (MQ=255)                                                          aCCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGAc                                                                                            <  8:178539/147‑1 (MQ=255)                                                              aGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCTAGCCTGCCAGGTTCACCGACGTAGAt                                                                                      >  2:267382/1‑149 (MQ=255)                                                              aGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGAt                                                                                      >  4:288398/1‑149 (MQ=255)                                                                   ttGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGa                                                                                 <  7:38645/149‑1 (MQ=255)                                                                     ggCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGaa                                                                                <  3:175816/148‑1 (MQ=255)                                                                      gCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAg                                                                               <  6:70342/148‑1 (MQ=255)                                                                        aaaaaaaaggccgctgcaagccgcagcggccaatcgagacgtcagatcaaggagcttcaaaatctacgtcggtgaacCTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGtt                                                                                                   >  8:199962‑M1/78‑126 (MQ=255)                                                                        aaaaaaaaggccgctgcaagccgcagcggccaatcgagacgtcagatcaaggagcttcaaaatctacgtcggtgaacCTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGtt                                                                                                   <  7:199962‑M1/49‑1 (MQ=255)                                                                        aCTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGAc                                                                                            <  6:12544/133‑1 (MQ=255)                                                                        aCTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGAc                                                                                            >  5:12544/1‑133 (MQ=255)                                                                        aCTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTc                                                                            <  6:300789/149‑1 (MQ=255)                                                                            ttGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGa                                                                                 <  5:85765/140‑1 (MQ=255)                                                                            ttGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGa                                                                                 >  6:85765/1‑140 (MQ=255)                                                                               ccTGATACGTACCGGTGAATGGCGACCGAAGCTATTTTTCCTGACTGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGCAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGAt                                                                      <  4:178237/148‑1 (MQ=255)                                                                                              tGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCTATTgg                                                      >  1:132059/1‑149 (MQ=255)                                                                                                aaTGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTATGAAGCTCCTTGATCTGACGTCTCGATTGGc                                                     <  1:31001/148‑1 (MQ=255)                                                                                                 aTGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCg                                                   <  6:163756/149‑1 (MQ=255)                                                                                                    tCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTg                                                >  8:26314/1‑149 (MQ=255)                                                                                                         aGAAGCTATTTTTCCGGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATc                                                                     <  6:232698/123‑1 (MQ=255)                                                                                                                 tttttCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCgg                                   >  1:24197/1‑149 (MQ=255)                                                                                                                        tGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCggagatag                             >  3:169466/1‑142 (MQ=255)                                                                                                                        tGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCg                                    <  4:169466/141‑1 (MQ=255)                                                                                                                        tGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCACCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCttttt                            >  7:40631/1‑149 (MQ=255)                                                                                                                          ggagcttcaaaatctacgtcggtgaacCTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAg                                                                                                      >  1:106369‑M1/28‑73 (MQ=255)                                                                                                                          ggagcttcaaaatctacgtcggtgaacCTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAg                                                                                                      <  2:106369‑M1/46‑1 (MQ=255)                                                                                                                            ggATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTg                        <  3:288398/149‑1 (MQ=255)                                                                                                                                cAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGt                    >  6:291013/1‑149 (MQ=255)                                                                                                                                  aGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCt                  >  1:51218/1‑149 (MQ=255)                                                                                                                                     gcTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCGGCGGCTTGCTGCGGCCGTTTTTTTGGCGTCTTaa               >  7:281777/1‑149 (MQ=255)                                                                                                                                       ttATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACa             >  4:44577/1‑149 (MQ=255)                                                                                                                                           tCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCa         >  7:290486/1‑149 (MQ=255)                                                                                                                                             ttGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCAcc       <  1:225549/149‑1 (MQ=255)                                                                                                                                             ttGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCAcc       >  2:175494/1‑149 (MQ=255)                                                                                                                                               gACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTg                        >  1:142267/1‑130 (MQ=255)                                                                                                                                               gACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTg                        <  2:142267/130‑1 (MQ=255)                                                                                                                                               gACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCAcc       <  3:44577/147‑1 (MQ=255)                                                                                                                                                  tCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCANGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCtttttttt                         <  1:98348/126‑1 (MQ=255)                                                                                                                                                  tCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCtttttttt                         >  2:98348/1‑126 (MQ=255)                                                                                                                                                  tCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCtttttttt                         >  2:94751/1‑126 (MQ=255)                                                                                                                                                  tCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCtttttttt                         <  1:94751/126‑1 (MQ=255)                                                                                                                                                  tCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGc  >  7:290912/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AAAATTACCGAAGCAGCAGAGTGAACGGATGATAAAGGCAATAGCGCAGGGAAGCTTACCCAGCACTTGGCACTGTTGCCTGATACGTAACGGTGAATGTCGACAGAAGCTATTTTTCCTGACGGATCAAGCGCTTATTCTTGACTCACTGGCCGGCTTGAAGGGCTCTCCCCCCCGCCTTTCAAGCCTGCCAGGTTCACCGACGTAGATTTTGAAGCTCCTTGATCTGACGTCTCGATTGGCCGCTGCGGCTTGCAGCGGCCTTTTTTTTGGCGTCTGAACATGCACCCTGGC  >  NC_002947/5248595‑5248888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.