New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5323902 =	69 (1.410)	4 (0.090)	4/252	NT	5.7%	coding (536/1563 nt)	PP_4684	kinase‑like domain‑containing protein
	?	NC_002947	5323957 =	67 (1.420)					coding (591/1563 nt)	PP_4684	kinase‑like domain‑containing protein

TCACCACCTTGCCATCGATCAAGGTGGCGTTGCCCAGGTGGATGTCACCGTGGCACTCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5324054‑5323902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAG  >  NC_002947/5323957‑5324080                                                                                                                                                                                                                                                                                       TCACCACCTTGCCATCGATCAAGGTGGCGTTGCCCAGGTGGATGTCACCGTGGCACTCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTCCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGC                                                                                                                                  <  1:226255/149‑1  CACCACCTTGCCATCGATCAAGGTGGCGTTGCCCAGGTGGATGTCACCGTGGCACTCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCT                                                                                                                                 >  8:245634/1‑149   ACCACCTTGCCATCGATCAAGGTGTCGTTGCCCAGGTGGATGTCACCGTGGCACTCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTG                                                                                                                                <  7:229097/149‑1   ACCACCTTGCCATCGATCAAGGTGGCGTTGCCCAGGTGGATGTCACCGTGGCACCCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTG                                                                                                                                <  3:125459/149‑1                                                                                              GCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGC                                      >  8:241576/1‑148                                                                                                  TTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGT                                 >  6:233094/1‑149                                                                                                               AAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGAT                    <  7:241576/149‑1                                                                                                                                 GCCTGCAGGGCGTCGAGTTGCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAG  <  5:233094/149‑1                                                                                                                                                     CTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGA   <  3:50331/128‑1                                                                                                                                                     CTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGA   >  4:50331/1‑128                                                                                                                                                                                                                                                                                       TCACCACCTTGCCATCGATCAAGGTGGCGTTGCCCAGGTGGATGTCACCGTGGCACTCACGGATGAAGCCATTGGCCTTGCGCTTTTCCAGCAGCCCTTGCAGGCGCTCGAAGCTGCTGCGGGCCCAGGCCTGCAGGGCGTCGAGTTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5324054‑5323902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATCGATGGCAAGGTGGTGATCTTCGATTGCATCGAGTTCAACGAG  >  NC_002947/5323957‑5324080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.