New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5323902 =	69 (1.410)	4 (0.090)	4/252	NT	5.7%	coding (536/1563 nt)	PP_4684	kinase‑like domain‑containing protein
	?	NC_002947	5323957 =	67 (1.420)					coding (591/1563 nt)	PP_4684	kinase‑like domain‑containing protein

GACCAGATGGCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATC  >  NC_002947/5323754‑5324038                                                                                                                                                     |                                                                                                                                           gACCAGATGGCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCt                                                                                                                                            <  5:16709/149‑1 (MQ=255) gACCAGATGGCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCt                                                                                                                                            >  1:288494/1‑149 (MQ=255)        tGGCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCaa                                                                                                                                    <  2:271670/149‑1 (MQ=255)          gCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAAc                                                                                                                                   <  7:50813/148‑1 (MQ=255)           cccGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTc                                                                                                                                 >  5:275978/1‑149 (MQ=255)           cccGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAACACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTc                                                                                                                                 >  7:240057/1‑149 (MQ=255)             cGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTc                                                                                                                                 >  6:217854/1‑147 (MQ=255)             cGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTc                                                                                                                                 <  5:217854/147‑1 (MQ=255)                    ttGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTACTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTg                                                                                                                        >  6:54759/1‑149 (MQ=255)                       ccGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCa                                                                                                                      <  5:209697/148‑1 (MQ=255)                       ccGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAg                                                                                                                     >  7:117097/1‑149 (MQ=255)                       ccGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAg                                                                                                                     >  6:262737/1‑149 (MQ=255)                         ctcgttgaactcgatgcaatcgaagatcaccaccttgccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTGCA‑GCAACTCGACGCCCTGCAGGc                                                                                                                   <  5:233094‑M1/25‑1 (MQ=255)                          tcgttgaactcgatgcaatcgaagatcaccaccttgccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTgca‑g                                                                                                                                       <  3:50331‑M1/5‑1 (MQ=255)                          tcgttgaactcgatgcaatcgaagatcaccaccttgccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTgca‑g                                                                                                                                       >  4:50331‑M1/124‑128 (MQ=255)                              tCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTggg                                                                                                              >  6:69544/1‑149 (MQ=255)                                  cTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGTAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCg                                                                                                         >  6:179925/1‑149 (MQ=255)                                    gCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCACAGCGACAAAGCCGATCTGCA‑GCAACTAGACGCCCTGCAGACCTGGG‑CCCgca                                                                                                       >  6:305985/1‑149 (MQ=255)                                          cccACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGACCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCt                                                                                                 <  5:262737/149‑1 (MQ=255)                                           ccACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCtt                                                                                                >  2:71227/1‑149 (MQ=255)                                           atcgaagatcaccaccttgccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCtt                                                                                                <  7:241576‑M1/43‑1 (MQ=255)                                            cACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTc                                                                                               <  5:205831/149‑1 (MQ=255)                                             aCGTGTGCCGATGGAGCACCCTCTGGGCACGCCAGATAGCGTTATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCg                                                                                              <  6:275978/149‑1 (MQ=255)                                                tgtgCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAgc                                                                                           >  3:52209/1‑149 (MQ=255)                                                 gtgCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAgcg                                                                                          >  2:170043/1‑149 (MQ=255)                                                   gCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGcc                                                                                        <  8:117097/149‑1 (MQ=255)                                                     cGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTg                                                                                      >  2:52171/1‑149 (MQ=255)                                                        tGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCaa                                                                                   <  1:81363/149‑1 (MQ=255)                                                        accttgccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCaa                                                                                   >  6:233094‑M1/94‑149 (MQ=255)                                                          gAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGATTCGAGCGCCTGCAAgg                                                                                 <  1:240645/149‑1 (MQ=255)                                                             gccatcgatcaaggtggcgttgcccaggtggatgtcaccgtggcactcacggatgaagccattggccttgcgcttttccagcagccctTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgc                                                                               >  8:241576‑M1/89‑148 (MQ=255)                                                              aCCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgctg                                                                             <  5:286535/149‑1 (MQ=255)                                                                ccGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGTAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgctgct                                                                           <  5:179925/149‑1 (MQ=255)                                                                ccGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgctgct                                                                           >  3:289128/1‑149 (MQ=255)                                                                 cGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGctgctg                                                                          >  1:275890/1‑149 (MQ=255)                                                                     gggCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGaa                                                                       >  6:160351/1‑148 (MQ=255)                                                                        cACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgctgct                                                                           >  8:245190/1‑141 (MQ=255)                                                                        cACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGgctgct                                                                           <  7:245190/141‑1 (MQ=255)                                                                           gCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAgcgc                                                                 >  6:151997/1‑148 (MQ=255)                                                                              agagagCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAgg                                                             >  3:250459/1‑149 (MQ=255)                                                                                agagCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGGTCCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGc                                                            <  1:71227/149‑1 (MQ=255)                                                                                  agCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCaa                                                         >  7:143074/1‑149 (MQ=255)                                                                                           gCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCAt                                                <  8:240057/149‑1 (MQ=255)                                                                                            ccccGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATc                                               >  7:245634/1‑149 (MQ=255)                                                                                               cGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGt                                            <  5:160351/149‑1 (MQ=255)                                                                                                 gTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAATCGCAAGGCCAATGGCTTCATCCGTGa                                          <  5:278971/149‑1 (MQ=255)                                                                                                 gTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGt                                            >  3:23254/1‑147 (MQ=255)                                                                                                 gTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGa                                          <  2:275890/149‑1 (MQ=255)                                                                                                      gCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGc                                      >  2:100076/1‑148 (MQ=255)                                                                                                         gAACTTCGAGCATATTCGCACATTCCTCAGCTACAAAGCCGATCTGAA‑GCAAATCGACGCCCTGGAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAgcgga                                                                <  8:277809/119‑3 (MQ=255)                                                                                                         gAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACg                                  <  4:52209/149‑1 (MQ=255)                                                                                                         gAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACg                                  <  4:295427/149‑1 (MQ=255)                                                                                                         gAACTTCGAGCAGATTCGCCCATTACTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGCCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCAGGAAAAGCGCa                                                                >  7:277809/1‑119 (MQ=255)                                                                                                           aCTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGt                                <  8:143074/149‑1 (MQ=255)                                                                                                            cTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCC‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCCTCCGTGAGTGCCACGGTg                               >  4:245473/1‑149 (MQ=255)                                                                                                            cTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCACGCAAATCGACGCCATGCAGGCCTGGG‑CCCGCAGCGGCTACGAGCGCATGCAAGGGCTGATGGAAAAGCGCAAGGCCAATGCATTCATCCGTGAGTGCCACGGt                                >  1:218136/1‑149 (MQ=255)                                                                                                               cGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGAc                             <  1:100076/148‑1 (MQ=255)                                                                                                               cGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACa                            >  3:275796/1‑149 (MQ=255)                                                                                                                 aGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATc                          <  2:288494/149‑1 (MQ=255)                                                                                                                   cAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCa                        <  1:52171/149‑1 (MQ=255)                                                                                                                      aTTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCt                     <  5:69544/149‑1 (MQ=255)                                                                                                                         cGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑TCAACTCGACGCGCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCATGCAAGGGCTGCTGGTAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCGACCTgg                   <  5:305985/148‑1 (MQ=255)                                                                                                                         cGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTgg                   <  4:23254/148‑1 (MQ=255)                                                                                                                          gCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTgag                  >  1:137442/1‑146 (MQ=255)                                                                                                                            ccATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTggg                  <  7:88048/146‑1 (MQ=255)                                                                                                                            ccATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTggg                  >  8:88048/1‑146 (MQ=255)                                                                                                                                  cTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCAc         <  1:170043/149‑1 (MQ=255)                                                                                                                                   tCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCAcc        >  4:112466/1‑149 (MQ=255)                                                                                                                                   tCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCAcc        >  3:24793/1‑149 (MQ=255)                                                                                                                                   tCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCAcc        >  8:40989/1‑149 (MQ=255)                                                                                                                                     aGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCtt      >  7:206284/1‑149 (MQ=255)                                                                                                                                       cGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCaa                                                                                   <  6:287153/70‑1 (MQ=255)                                                                                                                                       cGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCaa                                                                                   >  5:287153/1‑70 (MQ=255)                                                                                                                                       cGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGa    <  5:54759/149‑1 (MQ=255)                                                                                                                                         aCAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATc  <  3:112466/149‑1 (MQ=255)                                                                                                                                               ccGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGAc                             >  7:89448/1‑116 (MQ=255)                                                                                                                                               ccGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGAc                             <  8:89448/116‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                           GACCAGATGGCCCGGCAGATTGCCGAGTTTCACCTGCAGGCCCCACGTGTGCCGATGGAGCACCCGCTGGGCACGCCAGAGAGCGTGATGGCCCCGGTGGAGCAGAACTTCGAGCAGATTCGCCCATTCCTCAGCGACAAAGCCGATCTGCA‑GCAACTCGACGCCCTGCAGGCCTGGG‑CCCGCAGCAGCTTCGAGCGCCTGCAAGGGCTGCTGGAAAAGCGCAAGGCCAATGGCTTCATCCGTGAGTGCCACGGTGACATCCACCTGGGCAACGCCACCTTGATC  >  NC_002947/5323754‑5324038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.