| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5467023 | 61 (1.250) | 3 (0.060) | 3/250 | NT | 5.0% | coding (823/1002 nt) | rlpA | RlpA‑like lipoprotein |
| ? | NC_002947 | = 5467053 | 55 (1.180) | coding (793/1002 nt) | rlpA | RlpA‑like lipoprotein | |||||
CCCCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5466871‑5467023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGCGAGATCCA < NC_002947/5467053‑5466908 CCCCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTG < 6:77623/148‑1CCCCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCGGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGG > 5:255788/1‑149 CCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCG > 8:278459/1‑149 CCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCG > 8:118860/1‑149 AAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCAGAGCTTGGCGCG > 5:90464/1‑149 AGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCG > 4:63289/1‑148 GTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCG < 8:145917/147‑1 GTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCG > 7:145917/1‑147 TCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCC < 7:274289/148‑1 CGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAG > 3:58852/1‑148 CGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAG < 4:58852/148‑1 GGCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGC > 7:161918/1‑144 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGCGAGATC > 7:118860/1‑149 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGCGAGATC > 6:160592/1‑149 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCA > 6:281653/1‑135 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCA < 5:281653/135‑1 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATC > 4:210321/1‑131 GCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATC < 3:210321/131‑1 GCGTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGCGAGATCCA < 7:172390/149‑1 CCCCAAGTTCGCCAGGCGAATGCTGTCTTGTGCTTGCTGGATCTCGCCCTGGCTGCCGATCGGCCCCAGGCGCACGCGGTGCAGGGTCTGCTGGTTACGCACGATCGAGCTGATGAACACGGGTGCATTGACCATGGTGCTGAGCTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5466871‑5467023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgTTCGCCAACCCGGACGCTGCCGAGTTGCTGCGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCAGCCAGGGCGAGATCCA < NC_002947/5467053‑5466908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |