| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5550287 | 60 (1.230) | 5 (0.110) | 4/248 | NT | 8.4% | coding (529/1014 nt) | PP_4881 | iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 5550336 | 52 (1.120) | coding (578/1014 nt) | PP_4881 | iron ABC transporter substrate‑binding protein | |||||
GTATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5550138‑5550287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCCTG < NC_002947/5550336‑5550281 GTATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCC > 1:93386/1‑149GTATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCC > 3:127034/1‑149 TATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTTAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCG > 3:212376/1‑149 ACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCA < 3:71250/140‑1 ACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCA > 4:71250/1‑140 ACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCCTG < 6:128844/149‑1 ACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCC > 5:164565/1‑126 ACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCC < 6:164565/126‑1 ACCAGCGGTGCGTTCCAGGAGCAGGCCGGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCC > 7:19125/1‑82 ACCAGCGGTGCGTTCCAGGAGCAGGCCGGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCC < 8:19125/82‑1 GTATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5550138‑5550287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgGTCAACCATTCTTCAGTGGCTTCGCGCCCGTGCATCTTCAGAATGGCCACGGCCTG < NC_002947/5550336‑5550281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |