New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 555028760 (1.230)5 (0.110) 4/248 NT 8.4% coding (529/1014 nt) PP_4881 iron ABC transporter substrate‑binding protein
?NC_002947 = 5550336 52 (1.120)coding (578/1014 nt) PP_4881 iron ABC transporter substrate‑binding protein

TATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTAACAACTACTA  >  NC_002947/5550139‑5550435
                                                                                                                                                    |                                                                                                                                                    
tATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTTAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCG                                                                                                                                                      >  3:212376‑M1/1‑149 (MQ=255)
      cGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCa                                                                                                                                                <  3:106392/149‑1 (MQ=255)
        cccGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCAtt                                                                                                                                              >  2:115873/1‑149 (MQ=255)
          cGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCt                                                                                                                                            <  5:304108/149‑1 (MQ=255)
                            tACAACCCGAAGAAAGTCGACGAGAAAGAACTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGcgcg                                                                                                                           >  3:152098/1‑148 (MQ=255)
                              cAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGaa                                                                                                                         <  2:98640/148‑1 (MQ=255)
                               aaCCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGc                                                                                                                       >  2:69921/1‑149 (MQ=255)
                                 cccGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCa                                                                                                                     <  1:44393/149‑1 (MQ=255)
                                  ccGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCAc                                                                                                                    >  1:293663/1‑149 (MQ=255)
                                  ccGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCAc                                                                                                                    <  4:127034/149‑1 (MQ=255)
                                  ccGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTAGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCAc                                                                                                                    >  7:56966/1‑149 (MQ=255)
                                   cGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGAGTTCCAGGAGCAGGACGTGGCCATTCTGAAGATGCACGGGCGCGAAGACACt                                                                                                                   >  3:57323/1‑149 (MQ=255)
                                       gaaAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTg                                                                                                                  >  3:75572/1‑146 (MQ=255)
                                            tCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATgg                                                                                                          <  2:93386/149‑1 (MQ=255)
                                            tCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATgg                                                                                                          <  8:34166/149‑1 (MQ=255)
                                            tCGACGACAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCCGCTACGTCCCTACCAGCGGAGCGTACAAGGAGCAGACCGTGGACATTCTGAAGATGCACGGCCGCGAAGCCACTGAAGAAtcg                                                                                                          >  7:210894/1‑147 (MQ=255)
                                              gacgaGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGt                                                                                                         <  7:145695/148‑1 (MQ=255)
                                                cgaGAAAGACCTGCCGACCAAGTTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGa                                                                                                      <  4:212376/149‑1 (MQ=255)
                                                 gagaAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGAc                                                                                                     <  3:277443/149‑1 (MQ=255)
                                                 gagaAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGAc                                                                                                     >  1:18732/1‑149 (MQ=255)
                                                 gagaAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGAc                                                                                                     >  4:277443/1‑149 (MQ=255)
                                                    aaaGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGAc                                                                                                     <  2:303126/146‑1 (MQ=255)
                                                    aaaGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGAc                                                                                                     >  1:303126/1‑146 (MQ=255)
                                                        aCCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGgtcaaccattcttcagtggcttcgcgcccgtgcatcttcagaatggccacggcctg                                                                                              <  6:128844‑M1/149‑57 (MQ=255)
                                                             cctaCCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCTCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGaaa                                                                                           <  7:233966/144‑1 (MQ=255)
                                                                 ccACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTc                                                                                     <  2:18732/149‑1 (MQ=255)
                                                                  cACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCg                                                                                    <  1:69921/149‑1 (MQ=255)
                                                                       tGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGt                                                                                                         >  7:75582/1‑123 (MQ=255)
                                                                       tGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGt                                                                                                         <  8:75582/123‑1 (MQ=255)
                                                                         aTGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGc                                                                                  <  1:236962/144‑1 (MQ=255)
                                                                         aTGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGAGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGc                                                                                  >  2:236962/1‑144 (MQ=255)
                                                                            gACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACAAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTa                                                                          >  1:223239/1‑149 (MQ=255)
                                                                             aCTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGgtcaaccattcttcagtggcttcgcgcccgtgcatcttcagaatggccacggcc                                                                                                <  6:164565‑M1/126‑55 (MQ=255)
                                                                             aCTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGgtcaaccattcttcagtggcttcgcgcccgtgcatcttcagaatggccacggcc                                                                                                >  5:164565‑M1/1‑72 (MQ=255)
                                                                                tCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTacac                                                                       >  7:158534/1‑148 (MQ=255)
                                                                                 cGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCgg                                                                                   <  3:247348/135‑1 (MQ=255)
                                                                                 cGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCgg                                                                                   >  4:247348/1‑135 (MQ=255)
                                                                                     aaCCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAg                                                                                                                        >  4:290225/1‑94 (MQ=255)
                                                                                     aaCCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAg                                                                                                                        <  3:290225/94‑1 (MQ=255)
                                                                                        ccTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACAt                                                              >  2:154077/1‑149 (MQ=255)
                                                                                                        gcgTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCt                                              >  4:141642/1‑149 (MQ=255)
                                                                                                          gTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCATCAAAGCtgt                                            <  2:293663/149‑1 (MQ=255)
                                                                                                             ggCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTgg                                          >  2:7364/1‑148 (MQ=255)
                                                                                                              gCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGa                                         >  3:118315/1‑148 (MQ=255)
                                                                                                                tACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGaaa                                       >  3:184410/1‑148 (MQ=255)
                                                                                                                tACGTCACTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGaaa                                       >  3:180494/1‑148 (MQ=255)
                                                                                                                 aCGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTc                                                          <  6:95730/128‑1 (MQ=255)
                                                                                                                 aCGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTc                                                          >  5:95730/1‑128 (MQ=255)
                                                                                                                     cccTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGt                                  >  6:171550/1‑148 (MQ=255)
                                                                                                                       cTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTg                                 >  7:171951/1‑147 (MQ=255)
                                                                                                                       cTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGaa                               <  4:118315/149‑1 (MQ=255)
                                                                                                                         aCCAGCGGTGCGTTCCAGGAGCAGGCCGgtcaaccattcttcagtggcttcgcgcccgtgcatcttcagaatggccacggcc                                                                                                <  8:19125‑M1/82‑55 (MQ=255)
                                                                                                                         aCCAGCGGTGCGTTCCAGGAGCAGGCCGgtcaaccattcttcagtggcttcgcgcccgtgcatcttcagaatggccacggcc                                                                                                >  7:19125‑M1/1‑28 (MQ=255)
                                                                                                                           cAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCaacaac                                                                >  3:282341/1‑112 (MQ=255)
                                                                                                                           cAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCaacaac                                                                <  4:282341/112‑1 (MQ=255)
                                                                                                                           cAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTgg                           <  1:154077/149‑1 (MQ=255)
                                                                                                                                 tGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACcaac                                                                   >  6:202526/1‑103 (MQ=255)
                                                                                                                                 tGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACcaac                                                                   <  5:202526/103‑1 (MQ=255)
                                                                                                                                 tGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAg                     >  6:17409/1‑149 (MQ=255)
                                                                                                                                       ccAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTg                <  5:141509/148‑1 (MQ=255)
                                                                                                                                        cAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTgg               <  4:180494/148‑1 (MQ=255)
                                                                                                                                        cAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTgg               <  4:184410/148‑1 (MQ=255)
                                                                                                                                        cAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGt              <  8:56966/149‑1 (MQ=255)
                                                                                                                                         aGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGt              >  2:84818/1‑148 (MQ=255)
                                                                                                                                           gAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTaa           <  2:223239/149‑1 (MQ=255)
                                                                                                                                           gAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTaa           <  1:7364/149‑1 (MQ=255)
                                                                                                                                              cAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACcggcctgctcctggaacgcaccgctggtagggacgtagccgacgcgcccttcccactcagggttggcgaagtccatcaccgtggtcggcaggt        <  6:128844‑M2/149‑94 (MQ=255)
                                                                                                                                                ggCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACcggcctgctcctggaacgcaccgctggtagggacgtagccgacgcgcccttcccactcagggttggcgaagt                             <  6:164565‑M2/126‑73 (MQ=255)
                                                                                                                                                ggCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACcggcctgctcctggaacgcaccgctggtagggacgtagccgacgcgcccttcccactcagggttggcgaagt                             >  5:164565‑M2/1‑54 (MQ=255)
                                                                                                                                                ggCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACcggcctgctcctggaacgcaccgctggt                                                                         >  7:19125‑M2/1‑54 (MQ=255)
                                                                                                                                                ggCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACcggcctgctcctggaacgcaccgctggt                                                                         <  8:19125‑M2/82‑29 (MQ=255)
                                                                                                                                                 gCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGATGAGGAAAAAGGTGAAGTGCATGCAGTACTGCTTAACAact      >  7:58245/1‑148 (MQ=255)
                                                                                                                                                  ccGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTAACAactac    <  4:75572/149‑1 (MQ=255)
                                                                                                                                                    gTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTAACAactacta  <  3:141642/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TATCACCGCCCGTACGCGCATCGTGGTGTACAACCCGAAGAAAGTCGACGAGAAAGACCTGCCGACCACGGTGATGGACTTCGCCAACCCTGAGTGGGAAGGGCGCGTCGGCTACGTCCCTACCAGCGGTGCGTTCCAGGAGCAGGCCGTGGCCATTCTGAAGATGCACGGGCGCGAAGCCACTGAAGAATGGTTGACCGGCCTGAAAGCCTTCGGCAAGACCTACACCAACAACATGGTCGCCCTCAAAGCTGTGGAAAAAGGTGAAGTGGCTGCAGTACTGGTTAACAACTACTA  >  NC_002947/5550139‑5550435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.