| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5599510 = | 42 (0.860) | 4 (0.090) | 4/250 | NT | 8.4% | coding (3972/5418 nt) | PP_4924 | subtilase family serine protease |
| ? | NC_002947 | 5599554 = | 47 (1.010) | coding (3928/5418 nt) | PP_4924 | subtilase family serine protease | |||||
TGAACCAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5599663‑5599510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTGGTTCACTGCTGGCTGTCAGCAGCCGTTCATTGGCCTTGGT > NC_002947/5599554‑5599698 TGAACCAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTG > 3:225236/1‑149 ACCAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCG > 8:30447/1‑149 CCAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCag > 5:270652/1‑147 CAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGC < 1:141244/149‑1 GCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCG < 3:39275/92‑1 GCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCG > 4:39275/1‑92 CCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGT > 1:131006/1‑135 CCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGT < 2:131006/135‑1 CGGCCGACCATCGAGTGGACATGAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTGGTTCACTGCTGGCTGTCAGCAGCCGTTCATTGGCCTTGGT < 3:8554/149‑1 TGAACCAGTGGCTCAACAGGTTGCGGCGGGGCAGGTTGCGACTTTGTCTTTGACCCTGCCGGCTGATTTGCTGGTGGAGCATGTGGAGGTTGATGTCCACTCGATGGTCGGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5599663‑5599510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTGGTTCACTGCTGGCTGTCAGCAGCCGTTCATTGGCCTTGGT > NC_002947/5599554‑5599698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |