New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5599510 = | 42 (0.860) | 4 (0.090) | 4/250 | NT | 8.4% | coding (3972/5418 nt) | PP_4924 | subtilase family serine protease |
? | NC_002947 | 5599554 = | 47 (1.010) | coding (3928/5418 nt) | PP_4924 | subtilase family serine protease |
CAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTG > NC_002947/5599365‑5599658 | cAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTgccg > 8:109324/1‑149 (MQ=255) accaaggccaatgaacggctgctgacagccagcagtgaaccagtggctcaacaggttgcggcggggcaggttgcgactttgtctttgaccctgccggctgatttgctggtggagcatgtggaggttcatgtccactcgatggtcggccg < 3:8554‑M1/4‑1 (MQ=255) ccACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGc < 4:188249/148‑1 (MQ=255) ccACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGc > 7:153766/1‑148 (MQ=255) aCTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGa > 2:136450/1‑148 (MQ=255) cTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGaca > 2:104472/1‑149 (MQ=255) gCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGt < 2:268153/149‑1 (MQ=255) cGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGa < 2:11882/149‑1 (MQ=255) tctGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCAt > 2:230673/1‑149 (MQ=255) tctGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCACGCGCCACCAGCGTGAGCGTCAt > 7:260078/1‑149 (MQ=255) tgatgGGTCGACATCAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGATCCCTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAg < 1:230673/149‑1 (MQ=255) gggcGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggcggc < 5:207827/146‑1 (MQ=255) gTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggcggc > 6:207827/1‑148 (MQ=255) gAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATc > 5:80653/1‑148 (MQ=255) acaggttgcggcggggcaggttgcgactttgtctttgaccctgccggctgatttgctggtggagcatgtggaggttgatgtccactcgatggtcgGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAgg > 1:131006‑M1/96‑135 (MQ=255) acaggttgcggcggggcaggttgcgactttgtctttgaccctgccggctgatttgctggtggagcatgtggaggttgatgtccactcgatggtcgGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAgg < 2:131006‑M1/40‑1 (MQ=255) cccATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGt > 1:286121/1‑149 (MQ=255) tttGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACAt > 4:261530/1‑149 (MQ=255) gAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCa < 2:286121/148‑1 (MQ=255) aaCGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggcggc > 2:305587/1‑127 (MQ=255) aaCGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggcggc < 1:305587/127‑1 (MQ=255) cGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCt < 3:261530/149‑1 (MQ=255) gccgtGAAGGCGAATCGCCCAGATGGTCATCACCAGAGCCCGGCGCCTTTCCTGTGCGTTCGAGCAGTACGCTGCGCGTGGGGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGAGATCTACCTcc < 8:260078/145‑1 (MQ=255) cccTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGa < 6:28156/137‑1 (MQ=255) cccTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGa > 5:28156/1‑137 (MQ=255) aaCGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATg < 6:80653/148‑1 (MQ=255) cgAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTcca < 7:109324/149‑1 (MQ=255) gAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTccac > 4:216587/1‑149 (MQ=255) gAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCAGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTccac < 5:261409/149‑1 (MQ=255) aTCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTccacca > 4:292762/1‑149 (MQ=255) gATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCa < 8:153766/149‑1 (MQ=255) cggctgatttgctggtggagcatgtggaggttgatgtccactcgatggtcgGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggc > 4:39275‑M1/52‑92 (MQ=255) cggctgatttgctggtggagcatgtggaggttgatgtccactcgatggtcgGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAggc < 3:39275‑M1/41‑1 (MQ=255) tcaCCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGCCACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACAAGCAAAACAGCCGGCAg > 2:266817/1‑149 (MQ=255) aCCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCTAATCAGCCGGCAgg < 1:266817/148‑1 (MQ=255) agCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCaaa < 1:136450/149‑1 (MQ=255) agCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCaaa > 7:35104/1‑149 (MQ=255) agCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCaaa < 7:287915/149‑1 (MQ=255) cccGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTcc > 8:66218/1‑111 (MQ=255) cccGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTcc < 7:66218/111‑1 (MQ=255) ggCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACa > 8:168818/1‑148 (MQ=255) gAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCccgccg > 2:46568/1‑149 (MQ=255) aGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCcgccgc > 4:225236/1‑149 (MQ=255) aGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAAc > 3:301990/1‑149 (MQ=255) cGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGt < 1:46568/149‑1 (MQ=255) gCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGtt > 2:237899/1‑149 (MQ=255) cTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCACCCTGCCCCGCCGCAACCTGTTg > 7:30447/1‑149 (MQ=255) tGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGtt > 7:36368/1‑147 (MQ=255) cgcgTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGa < 7:168818/147‑1 (MQ=255) gTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGCGCCAc > 1:162043/1‑149 (MQ=255) gTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCAc < 1:104472/149‑1 (MQ=255) GCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTg < 1:141244‑M1/149‑1 (MQ=255) | CAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCAGGCGACACCAGCGTGAGCGTCATGTCGCCAAGGCGGCCGACCATCGAGTGGACATCAACCTCCACATGCTCCACCAGCAAATCAGCCGGCAGGGTCAAAGACAAAGTCGCAACCTGCCCCGCCGCAACCTGTTGAGCCACTG > NC_002947/5599365‑5599658 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |