New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5677796	46 (0.940)	4 (0.090)	4/252	NT	7.6%	coding (209/1860 nt)	PP_4983	amine oxidase
	?	NC_002947	= 5677835	53 (1.130)					coding (170/1860 nt)	PP_4983	amine oxidase

GGTGGCCAGGTCGCTGGCGCTGAAGTACTCGCCGTCGATCAGGTAACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5677645‑5677796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCAGCGAGTGGATCGGCAACGCCAAGGCACAGCCGGTGCTCAACCAGTACCTCGACCGTTTCAAGCTTGAAACACTGCCGGCGCCCGAGTTCGTGCGTACCCCGGGT  <  NC_002947/5677835‑5677690                                                                                                                                                                                                                                                                                                            GGTGGCCAGGTCGCTGGCGCTGAAGTACTCGCCGTCGATCAGGTAACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCG                                                                                                                                                        <  5:98388/148‑1  GTGGCCAGGTCGCTGGCGCTGAAGTACTCGCCGTCGATCAGGTAACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGC                                                                                                                                                       <  2:231812/148‑1                                          GGTAACCCGGGGTACGCACGAAGTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCC                                                                                                              >  7:47273/1‑149                                           GTAACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCA                                                                                                             >  4:234717/1‑149                                              ACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCA                                                                                                          <  3:234717/149‑1                                                CCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCAGC                                                                                                        <  8:47273/149‑1                                                                                                                                                      TGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCAGCGAGTGGATCGGCAACGCCAAGGCACAGCCGGTGCTTAACCAGTACCTCGACCGTTTCAAGCTTGAAACACTGCCGGCGCCCGAGTTCGTGCGTACCCCGGGT  >  2:182003/1‑149                                                                                                                                                      TGGAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCAGCGAGTGGATCGGCAACGCCAAGGCACAGCCGGTGCTCAACCAGTACCTCGACCGTTTCAAGCTTGAAACACTGCCGGCGCCCGAGTTCGTGCGTACCCCGGGT  >  6:215049/1‑149                                                                                                                                                                                                                                                                                                            GGTGGCCAGGTCGCTGGCGCTGAAGTACTCGCCGTCGATCAGGTAACCCGGGGTACGCACGAACTCGGGCGCCGGCAGTGTTTCAAGCTTGAAACGGTCGAGGTACTGGTTGAGCACCGGCTGTGCCTTGGCGTTGCCGATCCACTCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5677645‑5677796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggAGGCCAAGGCGGGCATGGGCGGGCGTTCGGGCCTGGCCACCAGCGAGTGGATCGGCAACGCCAAGGCACAGCCGGTGCTCAACCAGTACCTCGACCGTTTCAAGCTTGAAACACTGCCGGCGCCCGAGTTCGTGCGTACCCCGGGT  <  NC_002947/5677835‑5677690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.