New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5678173 =	46 (0.940)	3 (0.060)	3/252	NT	6.3%	intergenic (‑169/‑202)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
	?	NC_002947	5678240 =	45 (0.960)					intergenic (‑236/‑135)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA

GCAAAGCCCTGCAGGATGTGGTGCCGGAGTGAAGGCTCAGGCCTGAGGCTGTGCGCAGTCACCAGGTTCATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5678247‑5678173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGCGGCATTGCTTAGGCTTACGCGGTCGAACCACGCCGCAAAGCCAGGAGAAGTGCCCATGGGCCTCAATG  >  NC_002947/5678240‑5678387                                                                                                                                                                                                                                 GCAAAGCCCTGCAGGATGTGGTGCCGGAGTGAAGGCTCAGGCCTGAGGCTGTGCGCAGTCACCAGGTTCATGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTTGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTG                                                                            >  1:4910/1‑149    AAGCCCTGCAGGATGTGGTGCCGGAGTGAAGGCTCAGGCCTGAGGCTGTGCGCAGTCACCAGGTTCATGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCC                                                                              >  3:228636/1‑144    AAGCCCTGCAGGATGTGGTGCCGGAGTGAAGGCTCAGGCCTGAGGCTGTGCGCAGTCACCAGGTTCATGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCC                                                                              <  4:228636/144‑1                                                                        GCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGCGGCATTGCTTAGGCTTACGCGGTCGAACCACGCCGCAAAGCCAGGAGAAGTGCCCATGGGCCTC      >  7:149014/1‑148                                                                           GGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGCGGCATTGCTTAGGCTTACGCGGTCGAACCACGCCGCAAAGCCAGGAGAAGTGCCCATGGGCCTCAATG  <  2:103783/149‑1                                                                                                                                                                                                                                 GCAAAGCCCTGCAGGATGTGGTGCCGGAGTGAAGGCTCAGGCCTGAGGCTGTGCGCAGTCACCAGGTTCATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5678247‑5678173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGCGGCATTGCTTAGGCTTACGCGGTCGAACCACGCCGCAAAGCCAGGAGAAGTGCCCATGGGCCTCAATG  >  NC_002947/5678240‑5678387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.