New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5678173 =	46 (0.940)	3 (0.060)	3/252	NT	6.3%	intergenic (‑169/‑202)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
	?	NC_002947	5678240 =	45 (0.960)					intergenic (‑236/‑135)	PP_4983/bioA	amine oxidase/adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA

AGGTTACAGAAACGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGC  >  NC_002947/5678025‑5678319                                                                                                                                                     |                                                                                                                                                   cattgaggcccatgggcacttctcctggctttgcggcgtggttcgaccgcgtaagcctaagcaatgccgcagggcaggacaaccgctgccgttcaatggaggtgggggctggtccattcgagcctgctgccatgcacagagcaaagccc                                                                                                                                                    <  2:103783‑M1/1‑1 (MQ=255)     gaggcccatgggcacttctcctggctttgcggcgtggttcgaccgcgtaagcctaagcaatgccgcagggcaggacaaccgctgccgttcaatggaggtgggggctggtccattcgagcctgctgccatgcacagagcaaagccCTGc                                                                                                                                                 >  7:149014‑M1/145‑148 (MQ=255)      aCAGAAACGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCa                                                                                                                                                <  7:225620/148‑1 (MQ=255)        aGAAACGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGGCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATg                                                                                                                                              >  5:176184/1‑148 (MQ=255)         gAAACGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATTCGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGaa                                                                                                                                            >  1:217601/1‑149 (MQ=255)          taaCGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAAc                                                                                                                                           <  6:165351/148‑1 (MQ=255)           aaCGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAAcc                                                                                                                                          >  8:113705/1‑149 (MQ=255)             cGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTg                                                                                                                                        >  1:186523/1‑149 (MQ=255)              ggggAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCTTATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTgg                                                                                                                                       <  4:288989/149‑1 (MQ=255)                      gCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTgcg                                                                                                                               >  1:64768/1‑149 (MQ=255)                              gCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCt                                                                                                                       >  3:17043/1‑149 (MQ=255)                                 ccAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAg                                                                                                                    <  2:217601/149‑1 (MQ=255)                                   aGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGc                                                                                                                  >  1:192687/1‑149 (MQ=255)                                       aGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGa                                                                                                              <  4:17043/149‑1 (MQ=255)                                          tGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGc                                                                                                            <  2:64768/148‑1 (MQ=255)                                           gCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGcc                                                                                                           <  6:176184/148‑1 (MQ=255)                                            cGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCtt                                                                                                         <  7:155084/149‑1 (MQ=255)                                             gTTAAGAATACATCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTc                                                                                                        <  7:113705/149‑1 (MQ=255)                                                     tACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCAAATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGc                                                                                                <  4:282121/149‑1 (MQ=255)                                                             gTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATc                                                                                        >  7:43420/1‑149 (MQ=255)                                                                      cccTGCGAGCTCAGTGACATCTAGTCCTTATGGCAGGTCATTTTTTTGTCGGTATCTATGCCACAGAGTAGGAGGACCTCTGCATGATCCTGGTGACTGCGCTCAGCCTCAGGCCTGAGCCTTCACTCGGGCACCACATCCTGc                                                                                    <  7:90572/144‑1 (MQ=255)                                                                        cTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTAGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCtt                                                                             >  1:284683/1‑149 (MQ=255)                                                                        atatcAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTTTCGGTAGCTATGCCACACAGTAGCATGACCTCTGCATGAACCTGGTGACTGCGCACATCCTTAGGCCTGAGCCTTCACTTCGGCACCACATCCTGCAGGGCtt                                                                             <  7:194084/145‑1 (MQ=255)                                                                           caggacaaccgctgccgttcaatggaggtgggggctggtccattcaagcctgctgccatgcacagagcaaagccCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGc                                                                          >  1:4910‑M1/75‑149 (MQ=255)                                                                            cAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCATACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGct                                                                         >  3:26459/1‑149 (MQ=255)                                                                            cAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGct                                                                         >  4:65171/1‑149 (MQ=255)                                                                             ggacaaccgctgccgttcaatggaggtgggggctggtccattcgagcctgctgccatgcacagagcaaagccCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCtt                                                                             <  4:228636‑M1/72‑1 (MQ=255)                                                                             ggacaaccgctgccgttcaatggaggtgggggctggtccattcgagcctgctgccatgcacagagcaaagccCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCtt                                                                             >  3:228636‑M1/73‑144 (MQ=255)                                                                             aGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATACCACACAATAGAAGGACCTATGCATGAACCTGGTGAATGCGCACAGCATCAGGCCTGAGCCTTCACACCGGCACCACAACATGCAGGGCtt                                                                             >  8:194084/1‑144 (MQ=255)                                                                                      aCATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTg                                                                                     >  8:207719/1‑127 (MQ=255)                                                                                      aCATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTg                                                                                     <  7:207719/127‑1 (MQ=255)                                                                                        aTCAAGTCCTTTTGGCAGATCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCAGAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGgca                                                             <  7:267994/149‑1 (MQ=255)                                                                                         tCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGgcag                                                            >  3:68458/1‑149 (MQ=255)                                                                                              tCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGc                                                       >  1:270697/1‑149 (MQ=255)                                                                                                cTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTc                                                     <  8:43420/149‑1 (MQ=255)                                                                                                 ttttGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTc                                                     >  5:274356/1‑148 (MQ=255)                                                                                                      gCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATg                                                <  5:245165/148‑1 (MQ=255)                                                                                                       cAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGa                                              <  6:274356/149‑1 (MQ=255)                                                                                                           tCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCa                                                                                   <  7:47827/108‑1 (MQ=255)                                                                                                           tCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCa                                                                                   >  8:47827/1‑108 (MQ=255)                                                                                                           tCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAg                                          >  7:147821/1‑149 (MQ=255)                                                                                                           tCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAg                                          >  5:148272/1‑149 (MQ=255)                                                                                                             atatTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTTGTGACTGCGCACCGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGcc                                        >  1:213714/1‑149 (MQ=255)                                                                                                                      tCGGTAGCTATGCCACACAGTAGCAGCACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTc                                >  2:165164/1‑148 (MQ=255)                                                                                                                        ggTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCa                              <  4:68458/148‑1 (MQ=255)                                                                                                                        ggTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCAt                             <  6:23006/149‑1 (MQ=255)                                                                                                                                tGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGc                     >  6:254529/1‑149 (MQ=255)                                                                                                                                       ggatctcAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGtt              <  1:159289/143‑1 (MQ=255)                                                                                                                                           aGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTcc          >  5:48849/1‑149 (MQ=255)                                                                                                                                             cAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTcctg        >  7:88703/1‑149 (MQ=255)                                                                                                                                              aGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCACCCCCCACCTCCATTGAACGGCAGCGGtc              >  2:159289/1‑141 (MQ=255)                                                                                                                                               ggACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTcctgcc      <  2:192687/149‑1 (MQ=255)                                                                                                                                                   ctctGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTcctgccctgc  >  1:307122/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   AGGTTACAGAAACGGGGAGAGGCAGGAATGCCCCAGGAAGATGCGTTAAGAATACGTCAGGTCCGAGCACCCTGCCAGCGCAGTGACATCAAGTCCTTTTGGCAGCTCATATTTTTGTCGGTAGCTATGCCACACAGTAGCAGGACCTCTGCATGAACCTGGTGACTGCGCACAGCCTCAGGCCTGAGCCTTCACTCCGGCACCACATCCTGCAGGGCTTTGCTCTGTGCATGGCAGCAGGCTCGAATGGACCAGCCCCCACCTCCATTGAACGGCAGCGGTTGTCCTGCCCTGC  >  NC_002947/5678025‑5678319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.