New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5761802	58 (1.190)	4 (0.090)	4/250	NT	7.5%	coding (854/1536 nt)	gpmI	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
	?	NC_002947	= 5761832	43 (0.920)					coding (884/1536 nt)	gpmI	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase

GTCAAGGCCACGCGCATTGGCGAAGCCGTCAAGGTCGAAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5761654‑5761802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaaTACTGGGTCAGGCCGATGTACGCCGCCATCTTCGGCAGGCGCGCACGG  <  NC_002947/5761832‑5761785                                                                                                                                                                                                       GTCAAGGCCACGCGCATTGGCGAAGCCGTCAAGGTCGAAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAA                                                  >  3:53917/1‑149  TCAAGGCCACGCGCATTGGCGAAGCCGTCAAGGTCGAAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCG                                                    >  5:141714/1‑146                ATTGGCGAAGCCGTCAAGGTCGAAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAATACTGGGTCAGGCC                                    >  6:225465/1‑148                                      AAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAATACTGGGTCAGGCCGATGTACGCCGCCATCTTCGGCA             <  5:225465/149‑1                                         ATGGCTATGCCGGGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGGCGCGGGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAATACTGGGACAGGCCGATGTACGCCGCCATCTTCGGCAGGC          <  3:72806/149‑1                                                  CCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAATACTGGGTCAGGCCGATGTACGCCGCCATCTTCGGCAGGCGCGCACGG  <  4:53917/148‑1                                                                                                                                                                                                       GTCAAGGCCACGCGCATTGGCGAAGCCGTCAAGGTCGAAGATGGCGATGCCGTGATTTTCATGAACTTCCGCGCCGACCGTGCTCGCGAGCTGTCGCGTGCATTCGTAGAGCCAGACTTCACGGAATTCGCCCGTGCGCGCCTGCCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5761654‑5761802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaaTACTGGGTCAGGCCGATGTACGCCGCCATCTTCGGCAGGCGCGCACGG  <  NC_002947/5761832‑5761785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.