| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5884738 = | 66 (1.350) | 4 (0.090) | 4/250 | NT | 6.2% | coding (401/624 nt) | PP_5159 | hypothetical protein |
| ? | NC_002947 | 5884776 = | 59 (1.260) | coding (363/624 nt) | PP_5159 | hypothetical protein | |||||
ATTCTATCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5884782‑5884738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGCCTGCCCCGGGTCGATCCACT > NC_002947/5884776‑5884921 ATTCTATCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATT < 7:57003/121‑1ATTCTATCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATT > 8:57003/1‑121 CTATCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCGATAGAATGGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGG > 1:76008/1‑149 GTTTTCGCGACGATGACCGGCGATAGAAT‑GCCCCCGGGGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGC < 2:76008/148‑1 CGGCGATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGCCTGCCCCGGGTCGATCCA > 3:79927/1‑149 GATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGCCTGCCCCGGGTCGATCCACT > 7:136050/1‑147 GATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGCCTGCCCCGGGTCGATCCACT < 8:136050/147‑1 ATTCTATCGCCGGCACCTGGATCGTTTTCGCGACGATGACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5884782‑5884738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgATAGAAT‑GCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTACTGGTCGCAGGCCTCGGCCTGCCCCGGGTCGATCCACT > NC_002947/5884776‑5884921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |