New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5884738 =	66 (1.350)	4 (0.090)	4/250	NT	6.2%	coding (401/624 nt)	PP_5159	hypothetical protein
	?	NC_002947	5884776 =	59 (1.260)					coding (363/624 nt)	PP_5159	hypothetical protein

GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTAC  >  NC_002947/5884592‑5884884                                                                                                                                                   |                                                                                                                                                    gAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATgcgc                                                                                                                                                   >  2:12333/1‑149 (MQ=255) agtggatcgacccggggcaggccgaggcctgcgaccagtacctggcggccatggatcagctgcgcctggcaatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggcattctatc                                                                                                                                                     <  8:136050‑M1/1‑1 (MQ=255) agtggatcgacccggggcaggccgaggcctgcgaccagtacctggcggccatggatcagctgcgcctggcaatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggcattctatc                                                                                                                                                     >  7:136050‑M1/147‑147 (MQ=255)  aGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGcc                                                                                                                                                  >  3:120294/1‑149 (MQ=255)   tggatcgacccggggcaggccgaggcctgcgaccagtacctggcggccatggatcagctgcgcctggcaatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggcattctatCGCCg                                                                                                                                                 >  3:79927‑M1/145‑149 (MQ=255)    gCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCgg                                                                                                                                                >  7:71526/1‑149 (MQ=255)    gCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCg                                                                                                                                                 <  3:117577/148‑1 (MQ=255)    gCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCg                                                                                                                                                 >  4:117577/1‑148 (MQ=255)         tCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCAtc                                                                                                                                           >  7:232174/1‑149 (MQ=255)             ccGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCAtcgtcg                                                                                                                                       >  1:255499/1‑149 (MQ=255)              cGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTcgc                                                                                                                                      >  2:26234/1‑149 (MQ=255)                   ggAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGaaaa                                                                                                                                 <  8:71526/149‑1 (MQ=255)                    gAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCTTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCAGAGACCATGCGCCGGTCATCGTCGCGAAAAc                                                                                                                                >  8:159247/1‑149 (MQ=255)                    gAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAAc                                                                                                                                >  1:289514/1‑149 (MQ=255)                     gccgaggcctgcgaccagtacctggcggccatggatcagctgcgcctggcaatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatcccccgggggcattctatCGCCGGTCATCGTCGCGAAAAc                                                                                                                                <  2:76008‑M1/22‑1 (MQ=255)                         ccaccaGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑Tcc                                                                                                                          <  7:170042/149‑1 (MQ=255)                                  aaCCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCgg                                                                                                                 >  8:149572/1‑149 (MQ=255)                                    ccGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGc                                                                                                                >  8:102249/1‑148 (MQ=255)                                      ggCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGTGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGAt                                                                                                             <  1:223380/149‑1 (MQ=255)                                       gCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACAGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACAGCCGAGACCATGCGCCGGTCATCGACGCCAAAACGA‑TCCAGGTGCCGCCGATa                                                                                                            >  4:31555/1‑149 (MQ=255)                                        cctggcggccatggatcagctgcgcctggcaatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggccattctatCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAg                                                                                                           >  1:76008‑M1/108‑149 (MQ=255)                                         cACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGa                                                                                                          <  7:149572/149‑1 (MQ=255)                                              gCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGaaaa                                                                                                                                 >  7:248853/1‑122 (MQ=255)                                                     aTCGTGCTCGAAACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTg                                                                                              <  5:28393/149‑1 (MQ=255)                                                         tGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATa                                                                                          >  1:111571/1‑149 (MQ=255)                                                           cTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACa                                                                                        <  1:294406/149‑1 (MQ=255)                                                            tCGAAACCGTCGGCCAGGAAAATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGAACATGCGACGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATTCCACCGGTGGATACAg                                                                                       >  7:63909/1‑149 (MQ=255)                                                              gACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAg                                                                                       <  4:214828/147‑1 (MQ=255)                                                                   cGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTg                                                                                              >  2:174183/1‑135 (MQ=255)                                                                   cGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTg                                                                                              <  1:169529/135‑1 (MQ=255)                                                                   cGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTg                                                                                              <  1:174183/135‑1 (MQ=255)                                                                   cGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTg                                                                                              >  2:169529/1‑135 (MQ=255)                                                                    gTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGACCCCGGTGGATACAGGGCAAAGt                                                                               >  1:268484/1‑149 (MQ=255)                                                                     tCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTg                                                                              <  2:255499/149‑1 (MQ=255)                                                                       aatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggcattctatCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAAt                                                                                                        >  8:57003‑M1/77‑121 (MQ=255)                                                                       aatcaaccaaggccttttcctgggcctggaagacttcgaatgccactttgccctgtatccaccgggggcattctatCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAAt                                                                                                        <  7:57003‑M1/45‑1 (MQ=255)                                                                         ccAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCAt                                                                          >  6:90858/1‑149 (MQ=255)                                                                          cAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGC‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGCTACAGGGCAAAGTGGCAtt                                                                         >  7:221559/1‑149 (MQ=255)                                                                             gAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGa                                                                      <  8:232174/149‑1 (MQ=255)                                                                              aaCATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGaa                                                                     <  4:120294/149‑1 (MQ=255)                                                                              aaCATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGaa                                                                     <  2:111571/149‑1 (MQ=255)                                                                              aaCATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGaa                                                                     <  5:90858/149‑1 (MQ=255)                                                                                     gcAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTc                                                               >  7:65284/1‑148 (MQ=255)                                                                                          tGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGT‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGaa                                                                     >  3:213078/1‑137 (MQ=255)                                                                                          tGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGaa                                                                     <  4:213078/137‑1 (MQ=255)                                                                                            gCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCa                                                       <  1:26234/149‑1 (MQ=255)                                                                                                 cGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGaa                                                   >  4:216451/1‑148 (MQ=255)                                                                                                     aTGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGc                                              <  7:102249/149‑1 (MQ=255)                                                                                                     aTGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGc                                              <  1:12333/149‑1 (MQ=255)                                                                                                      tGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGcc                                             >  4:149006/1‑149 (MQ=255)                                                                                                       gCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCt                                            >  5:288143/1‑149 (MQ=255)                                                                                                        cGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCtt                                           <  8:65284/149‑1 (MQ=255)                                                                                                             gcgaGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCACGTGACGGCGATAGACTGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCGTTGGtt                                       >  6:248177/4‑148 (MQ=255)                                                                                                             gCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGtt                                       >  8:218337/1‑148 (MQ=255)                                                                                                             gCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGtt                                       <  3:205477/148‑1 (MQ=255)                                                                                                               cAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAg                                                <  1:36691/137‑1 (MQ=255)                                                                                                               cAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAg                                                >  2:36691/1‑137 (MQ=255)                                                                                                               cAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGAt                                    <  3:216451/149‑1 (MQ=255)                                                                                                                atccTTAATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTTGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGAtt                                   <  8:63909/147‑1 (MQ=255)                                                                                                                      cATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCa                               <  3:149006/147‑1 (MQ=255)                                                                                                                          gAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCa                               >  6:228439/1‑143 (MQ=255)                                                                                                                          gAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCa                               <  5:228439/143‑1 (MQ=255)                                                                                                                           aGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAg                        >  2:89627/1‑149 (MQ=255)                                                                                                                            ggTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGa                                                    >  7:132557/1‑120 (MQ=255)                                                                                                                            ggTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGa                                                    <  8:132557/120‑1 (MQ=255)                                                                                                                             gTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCt                      >  8:49999/1‑149 (MQ=255)                                                                                                                                aaGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGAt                   >  3:1383/1‑149 (MQ=255)                                                                                                                                  gCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCATGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATcc                 <  2:268484/149‑1 (MQ=255)                                                                                                                                  gCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATcc                 <  7:49999/149‑1 (MQ=255)                                                                                                                                  gCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATc                  >  1:90608/1‑148 (MQ=255)                                                                                                                                      cgccgAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATgg             >  8:225204/1‑149 (MQ=255)                                                                                                                                       gccgAGACCATGCGCCGGTCATCGTCGCGAAAACGAGTCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATgg             >  1:49532/1‑149 (MQ=255)                                                                                                                                        ccgAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCg                                                                       <  8:245120/89‑1 (MQ=255)                                                                                                                                        ccgAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGa                    <  3:51824/140‑1 (MQ=255)                                                                                                                                        ccgAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGa                    >  4:51824/1‑140 (MQ=255)                                                                                                                                        ccgAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGgcc           >  1:245164/1‑149 (MQ=255)                                                                                                                                             aCCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAg      <  2:49532/149‑1 (MQ=255)                                                                                                                                                 tGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGTCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCTAGGTAc  <  7:159247/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GAGGCACTTCGCCCGACAGGAATACCACCAGGCAACCGGCCACTGGCTCGACATCGTGCTCGACACCGTCGGCCAGGAACATGCGCAACTGGCCACCGTCATGCGGTTGCCAGCCTTCATTGAGGTAAAGCACCGCCGAGACCATGCGCCGGTCATCGTCGCGAAAACGA‑TCCAGGTGCCGGCGATAGAATGCCCCCGGTGGATACAGGGCAAAGTGGCATTCGAAGTCTTCCAGGCCCAGGAAAAGGCCTTGGTTGATTGCCAGGCGCAGCTGATCCATGGCCGCCAGGTAC  >  NC_002947/5884592‑5884884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.