| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6152833 = | 39 (0.800) | 4 (0.090) | 4/246 | NT | 10.9% | coding (414/489 nt) | PP_5738 | hypothetical protein |
| ? | NC_002947 | 6152875 = | 29 (0.630) | coding (456/489 nt) | PP_5738 | hypothetical protein | |||||
AGTGAGATCGGGCAACTGCTGCCGCATCAGTGGGTATCGGCCTGACTTACGCAAGGTGCGTTGGGCGGACGCTTACTACAGCGAGGCCATTTCGCATTGAAGGGTGACATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6152983‑6152833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggcaTGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTTGA > NC_002947/6152875‑6153021 aggGAGATGCGGCAACTGCTGCCGCATCAGTGGGCATCGGCCTGACTTCCGCAAGGTGCGTTGGGCGGACGCTTACTACAGCGAGGCCATTTCGCATTGAAGGGTGACATGCCGGTCCAGCTCAGTTGCCTTCGGCAACGGGCGACCGG < 5:64511/146‑1AGTGAGATCGGGCAACTGCTGCCGCATCAGTGGGTATCGGCCTGACTTACGCAAGGTGCGTTGGGCGGACGCTTACTACAGCGAGGCCATTTCGCATTGAAGGGTGACATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGG < 3:136148/149‑1AGTGAGATCGGGCAACTGCTGCCGCATCAGTGGGTATCGGCCTGACTTACGCAAGGTGCGTTGGGCGGACGCTTACTACAGCGAGGCCATTTCGCATTGAAGGGTGACATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGG > 3:301532/1‑149 ATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCATGTCACCCCTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGC > 3:191301/1‑141 ATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCATGTCACCCCTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGC < 4:191301/141‑1 GCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATC < 1:228088/145‑1 GCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATC > 2:228088/1‑145 GACCGGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACA > 8:252704/1‑148 GGCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGGCGGCAACCGCGTCAGCACATCTTT < 1:143791/149‑1 GCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTTG < 2:13247/149‑1 GCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTT > 4:133524/1‑148 GCATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAAACGCGTCAGCACATCTTT > 7:90596/1‑148 CATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTTGA < 4:62322/149‑1 CATGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTTGA < 5:213993/149‑1 AGTGAGATCGGGCAACTGCTGCCGCATCAGTGGGTATCGGCCTGACTTACGCAAGGTGCGTTGGGCGGACGCTTACTACAGCGAGGCCATTTCGCATTGAAGGGTGACATGCCGGTCCAGCTCACTTGCCTTCGGCAACGGGCGACCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6152983‑6152833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggcaTGTCACCCTTCAATGCGAAATGGCCTCGCTGTAGTAAGCGTCCGCCCAACGCACCTTGCGTAAGTCAGGCCGATACCCACTGATGCGGCAGCAGTTGCCCGATCTCACTGGCCCGCTGTGTCGGCAACCGCGTCAGCACATCTTTGA > NC_002947/6152875‑6153021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |