New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1025257	37 (0.760)	4 (0.080)	4/256	NT	9.3%	intergenic (‑111/+118)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	= 1025369	42 (0.880)					intergenic (‑223/+6)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein

GCCAGTGCGGTCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATT  >  NC_002947/1025118‑1025404                                                                                                                                             |                                                                                                                                                    gCCAGTGCGGTCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCt                                                                                                                                            >  3:192661/1‑149 (MQ=255)      tGCGGTCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCct                                                                                                                                       <  7:163077/149‑1 (MQ=255)       gCGGTCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATAACGCGGGCAGAATCGGGGCGTTGTGTTGTCCGTTCTGGcc                                                                                                                                        >  1:102661/1‑148 (MQ=255)           tCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATAGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTT                                                                                                                                                     >  5:310766‑M1/1‑130 (MQ=255)           tCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATAGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTT                                                                                                                                                     <  6:310766‑M1/130‑1 (MQ=255)             aaGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTcgc                                                                                                                                 <  6:163795/148‑1 (MQ=255)                gTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGc                                                                                                                             >  8:166015/1‑149 (MQ=255)                  gAATACTTTCAAGGTTAAAGCTCACTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGc                                                                                                                             >  4:83614/1‑147 (MQ=255)                        tttCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGc                                                                                                                     >  8:220053/1‑149 (MQ=255)                          tCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCTTGCCCGcg                                                                                                                    >  5:18524/1‑147 (MQ=255)                           cAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCTTGCCCGcga                                                                                                                   <  6:18524/148‑3 (MQ=255)                           cAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTcc                                                                                                                  >  1:288384/1‑149 (MQ=255)                               gTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCt                                                                                                                >  8:184604/1‑147 (MQ=255)                                   aaGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGt                                                                                                           <  2:288384/148‑1 (MQ=255)                                     gCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAgg                                                                                                        <  3:177764/149‑1 (MQ=255)                                        cccTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTgg                                                                                                                                          <  2:17599/112‑1 (MQ=255)                                        cccTTTCTTTTCTAGTTATGGCCGGCCTAGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTgg                                                                                                                                          >  1:17599/1‑112 (MQ=255)                                          ctttctttTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGgcg                                                                                                     >  4:211735/1‑147 (MQ=255)                                           tttcttttctAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAg                                                                                                  >  2:108597/1‑149 (MQ=255)                                               ttttctAGTTATGGCCGGCCTTGTGGGCCGGGTGATTACTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTc                                                                                              >  3:37290/1‑149 (MQ=255)                                                      gTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAAc                                                                                         <  7:220053/147‑1 (MQ=255)                                                      gTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGGTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAAc                                                                                         <  7:166015/147‑1 (MQ=255)                                                             ccggccTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTagccagtaccggcctcttcgcgggcaagcccgctcccacaggatctcgacaggttcggacactgcgccc                                                                                >  7:105103‑M1/1‑80 (MQ=255)                                                                 ccTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCt                                                                            >  6:311419/1‑149 (MQ=255)                                                                   ttGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGGCCGAACCTGTCGAGATCCtgt                                                                          >  2:234775/1‑149 (MQ=255)                                                                         gCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTagccagtaccggcctcttcgcgggcaagcccgctcccacaggatctcgacaggttcggacactgcgccctacctgagggag                                                                    >  6:75910‑M1/1‑68 (MQ=255)                                                                         gCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCGCAGGTAGGGCGGAGTGTGCGAACCTGTCGCGATCCTGTGGgcgc                                                                    >  7:256642/1‑149 (MQ=39)                                                                           cGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTagccagtaccggcctcttcgcgggcaagcccgctcccacaggatctcgacaggttcggacactgcgccctacctgagggagcg                                                                  <  5:75910‑M1/149‑84 (MQ=255)                                                                           cGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCgg                                                                  <  1:108597/149‑1 (MQ=255)                                                                            gggTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCggg                                                                 <  7:184604/149‑1 (MQ=255)                                                                             ggTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTagccagtaccggcctcttcgcgggcaagcccgctcccacaggatctcgacaggttcggacactgcgccctacctgagggagcggg                                                                <  8:105103‑M1/149‑86 (MQ=255)                                                                                       ggggTGTTGCCAGGGGTGCCGCGTGTTGGC‑CGGGATGATTCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCATGCCCGCTCCCTCCGGTAGGGCGCAGTGTCCGAACCTGTCTAGATCCTGTGGGAGGGGGCTTGCCCGCGa                                                      <  8:256642/147‑1 (MQ=255)                                                                                        cGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCTGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGaa                                                     <  3:83614/149‑1 (MQ=255)                                                                                         ggTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAag                                                    <  2:102661/149‑1 (MQ=255)                                                                                               gCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAACCCCCACCCACACGTAGGGCGCAGGGTCCGAACCAGTGGAGATACTGTGGGAGCGGGCGTGCCCGGGAAGAGGCCg                                              >  2:111613/1‑149 (MQ=255)                                                                                                          cgcgGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCATGCCCGCGAAGACGCCGGTTCTGGCTaa                                   <  1:167816‑M2/149‑3 (MQ=255)                                                                                                                 tCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTaa                            >  3:250989/1‑149 (MQ=255)                                                                                                                    c‑cGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATc                          >  3:66220/1‑148 (MQ=255)                                                                                                                        ggtaGATTCGGGGCTTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCCGGTTGGGCGCAGTGTCCTAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAaca                      <  4:66220/146‑1 (MQ=38)                                                                                                                          cAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACt                    >  7:232734/1‑149 (MQ=255)                                                                                                                               tCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAagag                                                  >  2:80673/1‑114 (MQ=255)                                                                                                                               tCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAagag                                                  <  1:80673/114‑1 (MQ=255)                                                                                                                               tCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGAGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCacac               >  4:252326/1‑149 (MQ=255)                                                                                                                                  gggCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCg             >  8:160025/1‑148 (MQ=255)                                                                                                                                            ttagccagaaccggcgtcttcgcgggcatgcccgctcccacaggatctcgacaggttcggacactgcgccctacctgagggagcgggcttgcccgcgaagaggccagaacggccaacacaacgccccgattctgcccggcgatcccgcg  <  1:167816‑M1/149‑148 (MQ=255)                                                                                                                                             |                                                                                                                                                    GCCAGTGCGGTCAAGGTGAATACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGC‑CGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATT  >  NC_002947/1025118‑1025404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.