New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2404543 =	66 (1.350)	4 (0.080)	3/254	NT	6.2%	coding (1170/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2404578 =	58 (1.220)					coding (1205/1209 nt)	PP_2106	ammonium transporter

GCATGGGCGGTGTCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGG  >  NC_002947/2404395‑2404690                                                                                                                                                      |                                                                                                                                                    gCATGGGCGGTGTCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGAc                                                                                                                                                     >  7:212478/1‑149 (MQ=255)   aTGGGCGGTGTCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCt                                                                                                                                                   >  5:227239/1‑149 (MQ=255)   aTGGGCGGTGTCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCt                                                                                                                                                   >  2:37138/1‑149 (MQ=255)     acacagcctcggccacttcgcagaggtggcagccgagggtgccgaacagttgacattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTg                                                                                                                                                  <  7:227772‑M1/4‑1 (MQ=255)       gCGGTGTCAGCCTGGTCAGACAGTTGCTGGGCAGCCTGATGGGCGTGCAGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTAGTGAGCTGCATGGCCTGCGCTTGAGACATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTc                                                                                                                                                >  7:92437/1‑148 (MQ=255)           tgtCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTg                                                                                                                                                  <  5:58301/142‑1 (MQ=255)           tgtCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTg                                                                                                                                                  >  6:58301/1‑142 (MQ=255)                gCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGTGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCg                                                                                                                                       >  2:63511/1‑148 (MQ=255)                gCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCg                                                                                                                                       >  5:239176/1‑148 (MQ=255)                  cTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGAt                                                                                                                                    >  5:151142/1‑149 (MQ=255)                  cTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGAt                                                                                                                                    <  4:294214/149‑1 (MQ=255)                     gTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCgg                                                                                                                                 >  7:5506/1‑149 (MQ=255)                      tCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGt                                                                                                                                >  4:158523/1‑149 (MQ=255)                      tCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGt                                                                                                                                <  6:227239/149‑1 (MQ=255)                      tCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGt                                                                                                                                <  2:220894/149‑1 (MQ=255)                          ccAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTa                                                                                                                            >  2:87754/1‑149 (MQ=255)                          ccAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCATGCGCTTGAGCCATGA‑GCAGGAGTTCAAGTGCGCGGCCATGTCGCTGCACCGGATCTTTGCt                                                                                                                             >  7:107968/1‑148 (MQ=255)                          agaggtggcagccgagggtgccgaacagttgacattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTg                                                                                                                                                  <  6:186966‑M1/4‑1 (MQ=255)                          agaggtggcagccgagggtgccgaacagttgacattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTg                                                                                                                                                  >  5:186966‑M1/125‑128 (MQ=255)                           cAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAc                                                                                                                           <  6:239176/149‑1 (MQ=255)                           cAGTTGCTGGGCAGCCTGAGGGGCGTGCTGGTTGCCTGGGCCGGTGGATTTGCCGTGTACGGAGCCTTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGTAGTTCCAGGGCGCGGTCCTGTCGCTGCACCGATCCGGTGcagc                                                                                                                           <  4:53059/149‑4 (MQ=255)                               tGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAccag                                                                                                                        <  6:310180/148‑1 (MQ=255)                                  tGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTAccagccag                                                                                                                    >  3:121740/1‑149 (MQ=255)                                    ggCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCgg                                                                                                                                 <  3:38736/134‑1 (MQ=255)                                    ggCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCgg                                                                                                                                 >  4:38736/1‑134 (MQ=255)                                     gCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGAt                                                                                                                 <  6:151142/149‑1 (MQ=255)                                        gCCTGATGGGCTTGCTTGTGGCCTTGGCCGGTGGATTTGCCGTGTACTGAGCCATTCGTGAGCTGCATGGCGTGCGCTTGAGCCAAGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                              <  8:282066/149‑1 (MQ=255)                                         gggtgccgaacagttgacattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                              >  8:266570‑M1/110‑149 (MQ=255)                                         ccTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAg                                                                                                             <  1:37138/149‑1 (MQ=255)                                         ccTGATGGGCGTGCTGGTGGCCTTAGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAg                                                                                                             >  8:51539/1‑149 (MQ=255)                                         ccTGATGGGCGTGCTGGGGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGACCCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                              <  1:87754/149‑1 (MQ=255)                                                   gTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcagg                                                                                                   >  7:133671/1‑149 (MQ=255)                                                       tggtggGCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGAGCTGCATGGCCTGGGGTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCa                                                                                               <  8:92437/149‑1 (MQ=255)                                                        ggtggCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAg                                                                                              >  6:118020/1‑149 (MQ=255)                                                          cattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                              <  3:212731‑M1/40‑1 (MQ=255)                                                          cattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                              >  4:212731‑M1/93‑132 (MQ=255)                                                           attcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGAtt                                                                                                                <  8:20251‑M1/38‑1 (MQ=255)                                                            gCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTg                                                                                          >  8:181909/1‑149 (MQ=255)                                                              cTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCTAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                        >  3:115137/1‑149 (MQ=255)                                                              cTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                        >  7:190289/1‑149 (MQ=255)                                                                   ccGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTgg                                                                                   <  8:133671/149‑1 (MQ=255)                                                                    cGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgc                                                                                  >  7:174680/1‑149 (MQ=255)                                                                      gTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgcgc                                                                                <  8:174680/149‑1 (MQ=255)                                                                        tgATTTGCCGTGTACGGAGCCATACGGGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgcgcgc                                                                              <  4:173903/148‑1 (MQ=255)                                                                         gATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGcc                                                                             >  6:14451/1‑149 (MQ=255)                                                                          aTTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCTCTGCACCGGATCGGTGCTAACAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCt                                                                            <  1:294848/149‑1 (MQ=255)                                                                                cGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGaa                                                                        >  4:173133/1‑147 (MQ=255)                                                                                cGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATa                                                                      <  8:212478/149‑1 (MQ=255)                                                                                 gtgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAg                                                                     >  5:301137/1‑149 (MQ=255)                                                                                 gtgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAg                                                                     >  3:262650/1‑149 (MQ=255)                                                                                    tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                   <  5:118020/148‑1 (MQ=255)                                                                                    tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                   <  8:5506/148‑1 (MQ=255)                                                                                    tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                   <  5:14451/148‑1 (MQ=255)                                                                                      cGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTc                                                                >  2:269766/1‑149 (MQ=255)                                                                                       ggAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCt                                                               >  4:39567/1‑149 (MQ=255)                                                                                             aTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCACGAGTTCCAGGGCGCGGACCTGTCGCTGCAACGGATCGGTGCTACCAGCCAGGATTGAGCCACGTCAGGTGCAGGGTGGGCGTGGCGCGCCTACAATAGGCTTCTgtgt                                                           >  4:149402/1‑147 (MQ=255)                                                                                                cGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGc                                                       <  3:158523/148‑1 (MQ=255)                                                                                                  tGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCaa                                                    >  8:232277/1‑149 (MQ=255)                                                                                                       tGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgg                                               >  6:73735/1‑149 (MQ=255)                                                                                                         cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgg                                               <  4:262650/147‑1 (MQ=255)                                                                                                         cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGa                                             <  7:232277/149‑1 (MQ=255)                                                                                                         cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGa                                             <  7:51539/149‑1 (MQ=255)                                                                                                          aTGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGAc                                            >  2:258934/1‑149 (MQ=255)                                                                                                          aTGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTAAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgggcc                                            >  7:193858/1‑147 (MQ=255)                                                                                                             gCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCCGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTg                                         >  8:39956/1‑149 (MQ=255)                                                                                                              ccTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                        <  5:73735/149‑1 (MQ=255)                                                                                                               cTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcaggt                                                                                                  >  6:187102/1‑90 (MQ=255)                                                                                                               cTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcaggt                                                                                                  <  5:187102/90‑1 (MQ=255)                                                                                                                  cgcTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCcac                                     <  6:301137/148‑1 (MQ=255)                                                                                                                    cTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAAc                                                   <  6:113468/132‑1 (MQ=255)                                                                                                                    cTTGAGCCATCA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAAc                                                   >  5:113468/1‑132 (MQ=255)                                                                                                                        ggCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACAtgctgc                              <  6:184689/148‑1 (MQ=255)                                                                                                                            aTGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTg                           >  5:138102/1‑148 (MQ=255)                                                                                                                               a‑GCAGGAGTTCCAGGGCGCGGACCTGTCGATGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAAt                        <  8:190289/148‑1 (MQ=255)                                                                                                                                        ttCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGt               >  6:199896/1‑149 (MQ=255)                                                                                                                                           cccggCGCGGCCCTTTCTCTGCACCGGATCTGTGCTACCATCCATGTTTGAGCCATGTCATGTGCATGGTGGGCGTTGCTCGCCTAGTATAGGCTTCTGTTTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCg            <  8:193858/146‑1 (MQ=255)                                                                                                                                            aGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCgg           <  4:121740/149‑1 (MQ=255)                                                                                                                                            aGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCgg           >  8:64396/1‑149 (MQ=255)                                                                                                                                                   ggACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTTTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTc    >  8:63158/1‑149 (MQ=255)                                                                                                                                                     aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACt                 <  8:3878/134‑1 (MQ=255)                                                                                                                                                     aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACt                 >  7:3878/1‑134 (MQ=255)                                                                                                                                                     aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCgg  >  7:279358/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCATGGGCGGTGTCAGCCTGGTCAGCCAGTTGCTGGGCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGG  >  NC_002947/2404395‑2404690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.