New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2404543 =	66 (1.350)	4 (0.080)	3/254	NT	6.2%	coding (1170/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2404578 =	58 (1.220)					coding (1205/1209 nt)	PP_2106	ammonium transporter

GCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGT  >  NC_002947/2404431‑2404722                                                                                                                                                     |                                                                                                                                                 gCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGAt                                                                                                                                                 <  6:151142/149‑1 (MQ=255)    gCCTGATGGGCTTGCTTGTGGCCTTGGCCGGTGGATTTGCCGTGTACTGAGCCATTCGTGAGCTGCATGGCGTGCGCTTGAGCCAAGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                                                              <  8:282066/149‑1 (MQ=255)     gggtgccgaacagttgacattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                                                              >  8:266570‑M1/110‑149 (MQ=255)     ccTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAg                                                                                                                                             <  1:37138/149‑1 (MQ=255)     ccTGATGGGCGTGCTGGTGGCCTTAGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAg                                                                                                                                             >  8:51539/1‑149 (MQ=255)     ccTGATGGGCGTGCTGGGGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGACCCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                                                              <  1:87754/149‑1 (MQ=255)               gTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcagg                                                                                                                                   >  7:133671/1‑149 (MQ=255)                   tggtggGCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGAGCTGCATGGCCTGGGGTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCa                                                                                                                               <  8:92437/149‑1 (MQ=255)                    ggtggCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAg                                                                                                                              >  6:118020/1‑149 (MQ=255)                      cattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                                                              >  4:212731‑M1/93‑132 (MQ=255)                      cattcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGa                                                                                                                                              <  3:212731‑M1/40‑1 (MQ=255)                       attcaggcagcatgtggcaggtcccgggttggcatacacagaagcctattctaggcgcgccacgcccaccctgcacctgacctggctcaatCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGAtt                                                                                                                                                <  8:20251‑M1/38‑1 (MQ=255)                        gCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTg                                                                                                                          >  8:181909/1‑149 (MQ=255)                          cTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCTAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                                                        >  3:115137/1‑149 (MQ=255)                          cTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTggg                                                                                                                        >  7:190289/1‑149 (MQ=255)                               ccGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTgg                                                                                                                   <  8:133671/149‑1 (MQ=255)                                cGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgc                                                                                                                  >  7:174680/1‑149 (MQ=255)                                  gTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgcgc                                                                                                                <  8:174680/149‑1 (MQ=255)                                    tgATTTGCCGTGTACGGAGCCATACGGGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGgcgcgc                                                                                                              <  4:173903/148‑1 (MQ=255)                                     gATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGcc                                                                                                             >  6:14451/1‑149 (MQ=255)                                      aTTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCTCTGCACCGGATCGGTGCTAACAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCt                                                                                                            <  1:294848/149‑1 (MQ=255)                                            cGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGaa                                                                                                        >  4:173133/1‑147 (MQ=255)                                            cGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATa                                                                                                      <  8:212478/149‑1 (MQ=255)                                             gtgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAg                                                                                                     >  3:262650/1‑149 (MQ=255)                                             gtgtACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAg                                                                                                     >  5:301137/1‑149 (MQ=255)                                                tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                                                   <  8:5506/148‑1 (MQ=255)                                                tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                                                   <  5:118020/148‑1 (MQ=255)                                                tACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGc                                                                                                   <  5:14451/148‑1 (MQ=255)                                                  cGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTc                                                                                                >  2:269766/1‑149 (MQ=255)                                                   ggAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCt                                                                                               >  4:39567/1‑149 (MQ=255)                                                         aTTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCACGAGTTCCAGGGCGCGGACCTGTCGCTGCAACGGATCGGTGCTACCAGCCAGGATTGAGCCACGTCAGGTGCAGGGTGGGCGTGGCGCGCCTACAATAGGCTTCTgtgt                                                                                           >  4:149402/1‑147 (MQ=255)                                                            cGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGc                                                                                       <  3:158523/148‑1 (MQ=255)                                                              tGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCaa                                                                                    >  8:232277/1‑149 (MQ=255)                                                                   tGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgg                                                                               >  6:73735/1‑149 (MQ=255)                                                                     cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgg                                                                               <  4:262650/147‑1 (MQ=255)                                                                     cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGa                                                                             <  7:51539/149‑1 (MQ=255)                                                                     cATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGa                                                                             <  7:232277/149‑1 (MQ=255)                                                                      aTGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGAc                                                                            >  2:258934/1‑149 (MQ=255)                                                                      aTGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTAAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCgggcc                                                                            >  7:193858/1‑147 (MQ=255)                                                                         gCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCCGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTg                                                                         >  8:39956/1‑149 (MQ=255)                                                                          ccTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGc                                                                        <  5:73735/149‑1 (MQ=255)                                                                           cTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcaggt                                                                                                                                  <  5:187102/90‑1 (MQ=255)                                                                           cTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCcaggtcaggt                                                                                                                                  >  6:187102/1‑90 (MQ=255)                                                                              cgcTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCcac                                                                     <  6:301137/148‑1 (MQ=255)                                                                                cTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAAc                                                                                   <  6:113468/132‑1 (MQ=255)                                                                                cTTGAGCCATCA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAAc                                                                                   >  5:113468/1‑132 (MQ=255)                                                                                    ggCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACAtgctgc                                                              <  6:184689/148‑1 (MQ=255)                                                                                        aTGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTg                                                           >  5:138102/1‑148 (MQ=255)                                                                                           a‑GCAGGAGTTCCAGGGCGCGGACCTGTCGATGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAAt                                                        <  8:190289/148‑1 (MQ=255)                                                                                                    ttCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGt                                               >  6:199896/1‑149 (MQ=255)                                                                                                       cccggCGCGGCCCTTTCTCTGCACCGGATCTGTGCTACCATCCATGTTTGAGCCATGTCATGTGCATGGTGGGCGTTGCTCGCCTAGTATAGGCTTCTGTTTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCg                                            <  8:193858/146‑1 (MQ=255)                                                                                                        aGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCgg                                           >  8:64396/1‑149 (MQ=255)                                                                                                        aGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCgg                                           <  4:121740/149‑1 (MQ=255)                                                                                                             tcaatcctggctggtagcaccgatccggtgcagcgacaggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATg                                                       >  4:212731‑M2/41‑132 (MQ=255)                                                                                                             tcaatcctggctggtagcaccgatccggtgcagcgacaggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATg                                                       <  3:212731‑M2/92‑1 (MQ=255)                                                                                                             tcaatcctggctggtagcaccgatccggtgcagcgacaggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCAccc                                      >  8:266570‑M2/41‑149 (MQ=255)                                                                                                               ggACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTTTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTc                                    >  8:63158/1‑149 (MQ=255)                                                                                                               aatcctggctggtagcaccgatccggtgcagcgacaggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAAt                                                        <  8:20251‑M2/91‑1 (MQ=255)                                                                                                                 aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACt                                                 <  8:3878/134‑1 (MQ=255)                                                                                                                 aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACt                                                 >  7:3878/1‑134 (MQ=255)                                                                                                                 aCCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCgg                                  >  7:279358/1‑149 (MQ=255)                                                                                                                     GTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGc                              <  7:226719‑M1/149‑1 (MQ=255)                                                                                                                      tCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGcc                             <  1:258934/149‑1 (MQ=255)                                                                                                                            cACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACctct                       >  5:232112/1‑149 (MQ=255)                                                                                                                            cACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACctct                       >  6:56061/1‑149 (MQ=255)                                                                                                                             accgatccGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGGTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTg                      <  1:97580/142‑1 (MQ=255)                                                                                                                              ccGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGc                     <  3:39567/149‑1 (MQ=255)                                                                                                                                ggATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCg                    >  4:9257/1‑148 (MQ=255)                                                                                                                                     ggTGCTACCAGCCAGGATTGAGCCTGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTgg              <  7:39956/149‑1 (MQ=255)                                                                                                                                           aCCAGCCAGGATTCAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTATAATAGGGTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTTAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAgg        <  1:63511/149‑1 (MQ=255)                                                                                                                                            ccagccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTCCGAAGTGGCCGAGGc       >  8:227772/1‑149 (MQ=255)                                                                                                                                             cagccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCt      >  7:269929/1‑149 (MQ=255)                                                                                                                                             cagccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCt      <  6:138102/149‑1 (MQ=255)                                                                                                                                               gccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCtgt    <  7:64396/149‑1 (MQ=255)                                                                                                                                               gccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCtgt    <  3:9257/149‑1 (MQ=255)                                                                                                                                                ccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCtgtg   <  3:173133/149‑1 (MQ=255)                                                                                                                                                ccagGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCtgtg   <  5:199896/149‑1 (MQ=255)                                                                                                                                                 caggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACctct                       <  6:186966‑M2/124‑1 (MQ=255)                                                                                                                                                 caggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACctct                       >  5:186966‑M2/5‑128 (MQ=255)                                                                                                                                                 caggATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTgtgt  <  7:227772‑M2/145‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 GCAGCCTGATGGGCGTGCTGGTGGCCTTGGCCGGTGGATTTGCCGTGTACGGAGCCATTCGTGCGCTGCATGGCCTGCGCTTGAGCCATGA‑GCAGGAGTTCCAGGGCGCGGACCTGTCGCTGCACCGGATCGGTGCTACCAGCCAGGATTGAGCCAGGTCAGGTGCAGGGTGGGCGTGGCGCGCCTAGAATAGGCTTCTGTGTATGCCAACCCGGGACCTGCCACATGCTGCCTGAATGTCAACTGTTCGGCACCCTCGGCTGCCACCTCTGCGAAGTGGCCGAGGCTGTGT  >  NC_002947/2404431‑2404722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.