New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2693981 =	53 (1.080)	3 (0.070)	3/246	NT	5.6%	coding (272/2394 nt)	PP_2362	usher protein
	?	NC_002947	2694052 =	51 (1.110)					coding (343/2394 nt)	PP_2362	usher protein

TTGCCCCCACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGCCAGAACAGCAAGTGGG  >  NC_002947/2693839‑2694125                                                                                                                                                 |                                                                                                                                                   atacaggtcgtagttgaacaaggcgccgaaactgctgcgcgcatcgctggccgggtaaaggttgcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtgtg                                                                                                                                                  <  1:157610‑M1/3‑1 (MQ=255) atacaggtcgtagttgaacaaggcgccgaaactgctgcgcgcatcgctggccgggtaaaggttgcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtgtg                                                                                                                                                  <  8:12011‑M1/3‑1 (MQ=255)  tacaggtcgtagttgaacaaggcgccgaaactgctgcgcgcatcgctggccgggtaaaggttgcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtGTGCAg                                                                                                                                               <  5:69951‑M1/6‑1 (MQ=255)   acaggtcgtagttgaacaaggcgccgaaactgctgcgcgcatcgctggccgggtaaaggttgcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtGTGCAGc                                                                                                                                              <  6:264318‑M1/7‑1 (MQ=255)    cccccACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑Cgg                                                                                                                                         >  8:141406/1‑149 (MQ=255)      cccACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCg                                                                                                                                       >  1:183025/1‑149 (MQ=255)      cccACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCg                                                                                                                                       >  1:279310/1‑149 (MQ=255)       ccACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCg                                                                                                                                       >  8:227452/1‑148 (MQ=255)        cACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGtc                                                                                                                                     >  5:93617/1‑149 (MQ=255)        cACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGtc                                                                                                                                     >  4:5979/1‑149 (MQ=255)           cGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCg                                                                                                                                  >  6:149590/1‑149 (MQ=255)            gCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGc                                                                                                                                 >  2:168187/1‑149 (MQ=255)                           cGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAAcccc                                                                                                                   >  6:119422/1‑148 (MQ=255)                               aTCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAggg                                                                                                              <  1:168187/149‑1 (MQ=255)                                tCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAgggg                                                                                                             <  1:125592/149‑1 (MQ=255)                                    cGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAgg                                                                                                         <  3:5979/149‑1 (MQ=255)                                     gAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAAGt                                                                                                        >  8:126045/1‑149 (MQ=255)                                        gCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGc                                                                                                     <  6:116624/149‑1 (MQ=255)                                          cACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGccc                                                                                                   <  1:16806/149‑1 (MQ=255)                                           atcgctggccgggtaaaggttgcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGcc                                                                                                    <  5:64689‑M1/47‑1 (MQ=255)                                              cTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGCAGGCGCGGGGCGGGTGTCACTCGAGAGCCAAGTATAGAGAGCAGC‑‑CGGACTCTCTCACCCGGCCAACCCACAGGGCGAGGtcccgcgg                                                                                                 >  1:88379/1‑142 (MQ=255)                                                   ccTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCa                                                                                          >  2:157610/1‑149 (MQ=255)                                                    cTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCAt                                                                                         >  5:12538/1‑149 (MQ=255)                                                             gtggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCgggg                                                                                  <  5:119422/147‑1 (MQ=255)                                                             gtggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGc                                                                                 <  2:183025/148‑1 (MQ=255)                                                             gtggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCt                                                                                <  6:12538/149‑1 (MQ=255)                                                             gtggtgAACCAGATGCCCAGGGTTGACCTGATACCGGAGCAGAAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGAGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCAAGGGGGAGGTGGCCCTGGACTGCATCGCGAGGCt                                                                                >  4:143033/1‑149 (MQ=255)                                                              tggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTg                                                                               <  7:248096/149‑1 (MQ=255)                                                              tggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAAGTGGCCCTGGACAGCATCGCGGGGCTg                                                                               <  7:126045/149‑1 (MQ=255)                                                               ggtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTg                                                                               >  2:231169/1‑148 (MQ=255)                                                                gtgAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGGACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGAGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGcc                                                                             >  5:4423/1‑148 (MQ=255)                                                                gcgatcacccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCt                                                                                >  7:16931‑M1/82‑148 (MQ=255)                                                                   aaCCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCacac                                                                          <  7:36725/149‑1 (MQ=255)                                                                    aCCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACAcc                                                                         <  6:93617/149‑1 (MQ=255)                                                                      cAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGa                                                                       <  1:231169/149‑1 (MQ=255)                                                                      acccacttgctgttctggcaaccaggctggcggcacctgcagcagcaggcgctggttctgactgtcgtagtcggtGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACAcc                                                                         >  6:64689‑M1/76‑149 (MQ=255)                                                                       aGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGAc                                                                      >  2:264663/1‑149 (MQ=255)                                                                        gATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACt                                                                     <  2:279310/149‑1 (MQ=255)                                                                          tGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTAc                                                                   <  5:149590/149‑1 (MQ=255)                                                                            cccAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGa                                                                 >  3:10756/1‑149 (MQ=255)                                                                             ccAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCt                                                                                <  8:53158/133‑1 (MQ=255)                                                                             ccAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCt                                                                                >  7:53158/1‑133 (MQ=255)                                                                                      aCCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGaa                                                        <  7:141406/148‑1 (MQ=255)                                                                                      aCCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAAc                                                       >  1:266604/1‑149 (MQ=255)                                                                                             aCCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGCGGCGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAgcg                                                  >  1:84204/1‑149 (MQ=255)                                                                                              ccGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAAGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCct                                               <  7:227452/149‑1 (MQ=255)                                                                                                    cagcagC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCctgctgc                                          <  4:10756/148‑1 (MQ=255)                                                                                                     agcagc‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGACCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCctgctgctg                                        >  7:12011/1‑149 (MQ=255)                                                                                                         gc‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAgg                                    >  7:148397/1‑149 (MQ=255)                                                                                                             g‑gccgggcGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTgc                                 <  8:148397/149‑1 (MQ=255)                                                                                                                ccgggcGGTTGTACCTTGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCGGCCGGGCAACCCCCAGGGGGAGGGGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTgccg                               <  6:4423/149‑1 (MQ=255)                                                                                                                       gTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCt                        <  2:266604/149‑1 (MQ=255)                                                                                                                             ccTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGc                  <  2:84204/149‑1 (MQ=255)                                                                                                                              cTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGcc                 <  5:151861/149‑1 (MQ=255)                                                                                                                              cTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGc                  >  6:294872/1‑148 (MQ=255)                                                                                                                                 gACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTc                                                            <  5:295639/103‑1 (MQ=255)                                                                                                                                 gACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTc                                                            >  6:295639/1‑103 (MQ=255)                                                                                                                                   cAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTTCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGCCAGAAc            <  2:88379/149‑1 (MQ=255)                                                                                                                                          gTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACa                                                               >  7:48673/1‑91 (MQ=255)                                                                                                                                          gTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACa                                                               <  8:48673/91‑1 (MQ=255)                                                                                                                                             ttGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGCCAGAACAGCAAGTggg  >  4:162/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                   TTGCCCCCACCGCCCACGGAGATGTCCGCCATCGCCGAGGCCACCCTTTACCTCGACCTGGTGGTGAACCAGATGCCCAGGGTTGACCTGATACCGGTGCAGCAGC‑GG‑GCCGGGCGGTTGTACCTGGACAGCGACGTATTGCGTGCAGC‑‑CGGCGTCTCGCTGCCGGGCAACCCCCAGGGGGAGGTGGCCCTGGACAGCATCGCGGGGCTGCACACCGACTACGACAGTCAGAACCAGCGCCTGCTGCTGCAGGTGCCGCCAGCCTGGTTGCCAGAACAGCAAGTGGG  >  NC_002947/2693839‑2694125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.