New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3512284	59 (1.210)	3 (0.060)	3/254	NT	5.4%	coding (952/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	= 3512314	48 (1.010)					coding (982/4158 nt)	PP_3108	rhs family protein

TCGACAGCGTACTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTGCAGCGTATCGAGAACGTCCTCGGCCACTTCCTG  >  NC_002947/3512141‑3512430                                                                                                                                                |                                                                                                                                                   tCGACAGCGTACTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAg                                                                                                                                               <  2:347/149‑1 (MQ=255)        cGTACTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGgtg                                                                                                                                         >  4:126976/1‑148 (MQ=255)        cGTACTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCACGCCCCCGAAGTACCGATCGTTACACTGCAACCGGGGCACGGCATCTACAACCCGCACGAGAAGgtc                                                                                                                                         >  4:229095/1‑147 (MQ=255)           aCTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTAcc                                                                                                                                     >  5:195182/1‑149 (MQ=255)             tCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTg                                                                                                                                   >  7:262422/1‑149 (MQ=255)                gCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGgtg                                                                                                                                >  2:5407/1‑149 (MQ=255)                   gcgGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGc                                                                                                                             <  3:229095/149‑1 (MQ=255)                          ggTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAgg                                                                                                                      >  4:216689/1‑149 (MQ=255)                                gcCCTGGGAGCAGAGCCTGTGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGgtg                                                                                                                                         >  8:33551/1‑124 (MQ=255)                                gcCCTGGGAGCAGAGCCTGTGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGgtg                                                                                                                                         <  7:33551/124‑1 (MQ=255)                                 cccTGGGAGCAGAGCCTGAGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCcctcggtgcacaccaggtacacctgctcgtgcggg                                                                                                                 <  2:57227‑M1/147‑36 (MQ=255)                                   cTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCcctcggtgcacaccaggtacacctgctcgtgcgggtt                                                                                                               <  3:7060‑M1/147‑38 (MQ=255)                                   cTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCcctcggtgcacaccaggtacacctgctcgtgcgggtt                                                                                                               >  4:7060‑M1/1‑110 (MQ=255)                                   cTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGc                                                                                                                             >  4:265945/1‑133 (MQ=255)                                   cTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGc                                                                                                                             <  3:265945/133‑1 (MQ=255)                                     gggAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTa                                                                                                            >  3:30478/1‑148 (MQ=255)                                      ggAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTa                                                                                                            <  1:5407/147‑1 (MQ=255)                                       gAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACAt                                                                                                         >  2:991/1‑149 (MQ=255)                                          cAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACt                                                                                                             >  8:107568/1‑142 (MQ=255)                                          cAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACt                                                                                                             <  7:107568/142‑1 (MQ=255)                                          cAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGACACTACATCCt                                                                                                      >  1:114243/1‑149 (MQ=255)                                            gagCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGgtg                                                                                                                                <  8:287027/121‑1 (MQ=255)                                            gagCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGgtg                                                                                                                                >  7:287027/1‑121 (MQ=255)                                            gagCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTg                                                                                                     >  6:47848/1‑148 (MQ=255)                                             agCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCa                                                                                                   <  5:215279/149‑1 (MQ=255)                                              gCCTGCGCCGCCAGGGGGCATTCATCAACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGCGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAg                                                                                                  <  8:292668/149‑1 (MQ=255)                                                    gccgccAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTc                                                                                            <  4:30478/149‑1 (MQ=255)                                                      cgccAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGa                                                                                          <  3:126976/149‑1 (MQ=255)                                                                 aTTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTg                                                                                                                                   >  6:96999/1‑97 (MQ=255)                                                                 aTTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTg                                                                                                                                   <  5:96999/97‑1 (MQ=255)                                                                  ttCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGAAACCGGGGCAGCGCATCTACAACCCGCAAGAGCATTTGTACCTTGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGttctt                                                                              <  5:213443/149‑1 (MQ=255)                                                                     aTCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGtgagtttc                                                                           >  1:263773/1‑142 (MQ=255)                                                                     aTCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTa                                                                           <  8:262422/149‑1 (MQ=255)                                                                         aCCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCCCCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACttt                                                                       >  6:44625/1‑149 (MQ=255)                                                                          ccTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTATGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTg                                                                      <  6:195182/149‑1 (MQ=255)                                                                           cTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTgg                                                                     <  2:250220/149‑1 (MQ=255)                                                                           cTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTgg                                                                     <  3:216689/149‑1 (MQ=255)                                                                           cTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTgg                                                                     <  5:47848/149‑1 (MQ=255)                                                                            tCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGc                                                                    >  3:270102/1‑149 (MQ=255)                                                                                cGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAg                                                                >  6:174057/1‑149 (MQ=255)                                                                                  aCAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTg                                                              >  2:193569/1‑149 (MQ=255)                                                                                  aCAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGAAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTg                                                              >  2:55661/1‑149 (MQ=255)                                                                                     aCCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCa                                                           <  5:174057/149‑1 (MQ=255)                                                                                      ccAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGttctt                                                                              >  5:47474/1‑129 (MQ=255)                                                                                      ccAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGttctt                                                                              <  6:47474/129‑1 (MQ=255)                                                                                       cAGGGCCGCGAAGTCCCGTTCGTGCCCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGa                                                         >  5:40315/1‑149 (MQ=255)                                                                                         gggCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGaca                                                       <  1:55661/149‑1 (MQ=255)                                                                                           gCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACAcc                                                     <  5:44625/149‑1 (MQ=255)                                                                                                     cccGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCg                                              <  1:274409/146‑1 (MQ=255)                                                                                                     cccGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCg                                              >  2:274409/1‑146 (MQ=255)                                                                                                      ccGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGa                                                                                                 >  4:197340/1‑94 (MQ=255)                                                                                                      ccGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGa                                                                                                 <  3:197340/94‑1 (MQ=255)                                                                                                       cGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTg                                         >  6:294403/1‑149 (MQ=255)                                                                                                        gTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGc                                        <  4:270102/149‑1 (MQ=255)                                                                                                            gTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTAGATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGacac                                                      >  1:99543/1‑131 (MQ=255)                                                                                                            gTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGacac                                                      <  2:99543/131‑1 (MQ=255)                                                                                                               aCCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGATGTGCCAGACACCAACACCGAAGTGCCGCTGCa                                 <  1:193569/149‑1 (MQ=255)                                                                                                               aCCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTg                                   >  3:6862/1‑147 (MQ=255)                                                                                                                          ggggCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTGCAGCGTATCgag                       >  1:178043/1‑148 (MQ=255)                                                                                                                                   cATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTGCAGCGTATCGAGAACGTCCTCg             <  1:991/149‑1 (MQ=255)                                                                                                                                      cTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAacac                                                >  4:122145/1‑111 (MQ=255)                                                                                                                                      cTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAacac                                                <  3:122145/111‑1 (MQ=255)                                                                                                                                          aaCCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGgcgggttgtagatgcgctgccccggttgcagggtcacgaacgggacttcgcggccctggttgtcggtgaggtagatgaatgccccctggcggcgcaggctctgctcccag        >  4:7060‑M2/1‑37 (MQ=255)                                                                                                                                          aaCCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGgcgggttgtagatgcgctgccccggttgcagggtcacgaacgggacttcgcggccctggttgtcggtgaggtagatgaatgccccctggcggcgcaggctctgctcccag        <  3:7060‑M2/147‑111 (MQ=255)                                                                                                                                           aCCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTGCAGCGTATCGAGAACGTCCTCGGCCACTTc     <  2:178043/149‑1 (MQ=255)                                                                                                                                            cccGCACGAGCAGGTGTACCTGGTGTGCACCGAGGgcgggttgtagatgcgctgccccggttgcagggtcacgaacgggacttcgcggccctggttgtcggtgaggtagatgaatgccccctggcggctcaggctctgctcccaggg      <  2:57227‑M2/147‑113 (MQ=255)                                                                                                                                              cGCACGATCAGGTGTACCTGGTGTGCACTGAGGGCTGTCACTACATCCTGCAGACACTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCTGACACCAACAGCGAAGTGCCGCTGCAGCGTATCGAGAACGTCCTCGGCCACTTCCTg  <  2:114243/149‑1 (MQ=255)                                                                                                                                               gCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGaa                                            >  8:42504/1‑106 (MQ=255)                                                                                                                                                |                                                                                                                                                   TCGACAGCGTACTCGGCCGCGGCTGGGTGCTGCCCTGGGAGCAGAGCCTGCGCCGCCAGGGGGCATTCATCTACCTCACCGACAACCAGGGCCGCGAAGTCCCGTTCGTGACCCTGCAACCGGGGCAGCGCATCTACAACCCGCACGAGCAGGTGTACCTGGTGTGCACCGAGGGCGGTCACTACATCCTGCAGACCCTCGACAACCTGTTCTTCTACTTTGGCGAAGTGCCAGACACCAACACCGAAGTGCCGCTGCAGCGTATCGAGAACGTCCTCGGCCACTTCCTG  >  NC_002947/3512141‑3512430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.