New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3586143 =	34 (0.690)	3 (0.060)	3/250	NT	8.3%	coding (337/1329 nt)	benK	benzoate MFS transporter
	?	NC_002947	3586190 =	34 (0.730)					coding (384/1329 nt)	benK	benzoate MFS transporter

CTATGCGCTGTTCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCTGGGCGGCAT  >  NC_002947/3585995‑3586282                                                                                                                                                     |                                                                                                                                            catcgactcccagccaaaacgcggcagcatgaagatgccgacacctgccgacagcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttgg                                                                                                                                             >  5:312163‑M1/149‑149 (MQ=255) cTATGCGCTGTTCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTg                                                                                                                                             <  2:159722/149‑1 (MQ=255)  atcgactcccagccaaaacgcggcagcatgaagatgccgacacctgccgacagcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttggg                                                                                                                                            <  8:3827‑M1/2‑1 (MQ=255)  atcgactcccagccaaaacgcggcagcatgaagatgccgacacctgccgacagcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttggg                                                                                                                                            >  8:2780‑M1/148‑149 (MQ=255)    tGCGCTGTTCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCa                                                                                                                                          <  3:14946/149‑1 (MQ=255)      actcccagccaaaacgcggcagcatgaagatgccgccacctgccgacagcctgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcgtgggtgcgtattcgttcatcagtgccacggcgttgGGCAt                                                                                                                                         <  5:289003‑M1/5‑1 (MQ=255)        cTGTTCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTa                                                                                                                                      >  2:178737/1‑149 (MQ=255)           ttCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTAcc                                                                                                                                    <  7:274470/148‑1 (MQ=255)              ggCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCtt                                                                                                                                <  4:32193/149‑1 (MQ=255)                      gTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCg                                                                                                                        >  6:299442/1‑149 (MQ=255)                           gcgcCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCt                                                                                                                    <  3:237752/148‑1 (MQ=255)                           gcgcCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCt                                                                                                                    >  4:237752/1‑148 (MQ=255)                               ccTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGAAACCCGAGCGAGTTTGGCATCTACCGCTTCATCTCCGGCCTGCGCt                                                                                                               >  8:199632/1‑149 (MQ=255)                               ccTCGCCTTCCGCACCCTGGCCGACCCCATCGGGCGCAAGAAGGGCAATTCAATCTGTTTCGCCTTGTTGACGAGGGCGAGCATCCTCAATGTCTTTGCCAGCAACCCGAGCGAGTTTGGCAACTACCGCTTCAACGACAGCCTCGGCt                                                                                                               >  8:199630/1‑149 (MQ=255)                                 tGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCtgt                                                                                                             >  6:116860/1‑149 (MQ=255)                                                 cgacagcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttgGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGccc                                                                                              <  4:23193‑M1/48‑1 (MQ=255)                                                  gacagcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttgGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCaa                                                                                            >  3:23193‑M1/100‑149 (MQ=255)                                                     agcatgccgcccagcgaataaccactgaacatgatcgccaccagcgtgctgcgcaggcgcttgggtgcgtattcgttcatcagtgccacggcgttgGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGc                                                                                         >  6:147096‑M1/97‑149 (MQ=255)                                                         gCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGTGCTGTGGCGGCCTGATGCCCAACGCCGTg                                                                                     <  1:178737/149‑1 (MQ=255)                                                         gCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTg                                                                                     <  5:299442/149‑1 (MQ=255)                                                              gggCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACt                                                                                <  6:233810/149‑1 (MQ=255)                                                                                gCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCAc                                                               <  7:219477/148‑1 (MQ=255)                                                                                        tttCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTggg                                                                                                                 >  5:141936/1‑90 (MQ=255)                                                                                        tttCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTggg                                                                                                                 <  6:141936/90‑1 (MQ=255)                                                                                          tCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAAGCCGAGCGAGTTTGGAATTTACGGGTTCATCTCCGGCCTGGGCTGTGGAGGCCTGATGCCGAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCt                                                     <  7:199630/148‑1 (MQ=255)                                                                                          tCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCTCTTCATCGCCGGCCAGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCt                                                     <  7:199632/148‑1 (MQ=255)                                                                                                   tctcGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCCCg                                           >  8:204282/1‑149 (MQ=255)                                                                                                   tctcGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACg                                           >  7:231229/1‑149 (MQ=255)                                                                                                    ctcGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGc                                          >  5:109804/1‑149 (MQ=255)                                                                                                    ctcGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGc                                          >  1:217756/1‑149 (MQ=255)                                                                                                     tcGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCt                                         >  5:232504/1‑149 (MQ=255)                                                                                                           gCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGc                                   >  7:3827/1‑149 (MQ=255)                                                                                                              aCCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGAt                                <  6:109804/149‑1 (MQ=255)                                                                                                                 aTCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCAt                             <  6:232504/149‑1 (MQ=255)                                                                                                                 aTCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCAt                             >  3:134324/1‑149 (MQ=255)                                                                                                                       aaTGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAg                       <  2:217756/149‑1 (MQ=255)                                                                                                                                gCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTc              >  6:208505/1‑149 (MQ=255)                                                                                                                                   aGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCt           <  4:134324/149‑1 (MQ=255)                                                                                                                                    gCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACTAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGtt                          <  4:212842/133‑1 (MQ=255)                                                                                                                                    gCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGCCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGtt                          >  3:212842/1‑133 (MQ=255)                                                                                                                                       aCCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCTGggc       <  5:116860/149‑1 (MQ=255)                                                                                                                                         ccGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCTGggcgg     >  5:54174/1‑149 (MQ=255)                                                                                                                                            agcgagTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCTGGGCGGCAt  <  8:231229/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                            CTATGCGCTGTTCGGCATGATGTTCGGCGCCCTGGCCTTCGGCAGCCTGGCCGACCGCATCGGGCGCAAGAAGGGCATTGCCATCTGTTTCGCCTTGTTCTCGGGGGCGACCATCCTCAATGGCTTTGCCAGCAACCCGAGCGAGTTTGGCATCTACCGCTTCATCGCCGGCCTGGGCTGTGGCGGCCTGATGCCCAACGCCGTGGCACTGATGAACGAATACGCACCCAAGCGCCTGCGCAGCACGCTGGTGGCGATCATGTTCAGTGGTTATTCGCTGGGCGGCAT  >  NC_002947/3585995‑3586282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.