New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3656110 =	37 (0.760)	4 (0.090)	4/246	NT	10.2%	coding (283/1620 nt)	PP_3220	ABC transporter ATP‑binding protein
	?	NC_002947	3656175 =	36 (0.780)					coding (218/1620 nt)	PP_3220	ABC transporter ATP‑binding protein

AGGCCGACCTGGTCCAGCAGCGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAGGGTCGATTTGCCCGAGC  >  NC_002947/3655965‑3656256                                                                                                                                                  |                                                                                                                                                     ccctgcgccagctgtcgttcagcctggtccagggcgagaccctggcggtggtgggcgagtcaggctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGAt                                                                                                                                                   <  5:188095‑M1/4‑1 (MQ=255) ccctgcgccagctgtcgttcagcctggtccagggcgagaccctggcggtggtgggcgagtcaggctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGAt                                                                                                                                                   >  4:82149‑M1/146‑149 (MQ=255)  ggCCGACCTGGTCCAGCAGCGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATg                                                                                                                                                  <  6:129023/149‑1 (MQ=255)           ggTCCAGCAGCGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCcg                                                                                                                                         >  5:242075/1‑149 (MQ=255)            gTCCAGCAGCGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCcgc                                                                                                                                        >  8:219666/1‑149 (MQ=255)                 gcagcGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTCGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAAc                                                                                                                                 <  4:296127/149‑1 (MQ=255)                     cgcCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAActggc                                                                                                                             <  2:143019/149‑1 (MQ=255)                             ccTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAActggcgcctggcg                                                                                                                     <  4:11440/149‑1 (MQ=255)                                 ggcctcttggcctGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGtt                                                                                                                 >  8:67842/1‑149 (MQ=255)                                  gcgagaccctggcggtggtgggcgagtcaggctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATg                                                                                                                                                  >  8:81729‑M1/113‑117 (MQ=255)                                  gcgagaccctggcggtggtgggcgagtcaggctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATg                                                                                                                                                  <  7:81729‑M1/5‑1 (MQ=255)                                    ctcttggcctGGATAGCGTCGTCCAAGCGCAAGCTGCAGAGCCTCGGCGATTTGCTGGCCGATACTTTGGGTTGGGTTGAGGCTGACCATTGGGTATTTAGGCACAAGGACGATGGTGCTCCCGC‑‑GCAAATGGCGCCTGGAGCGTTCGc                                                                                                              >  8:174960/1‑149 (MQ=255)                                         cctggcggtggtgggcgagtcaggctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCt                                                                                                         <  8:282024‑M1/44‑1 (MQ=255)                                          gcctGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCtt                                                                                                        >  1:20332/1‑149 (MQ=255)                                            ctGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTgc                                                                                                      >  7:281245/1‑149 (MQ=255)                                                     gtcgtcCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATc                                                                                              >  3:236928/1‑148 (MQ=255)                                                      tcgtcCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGa                                                                                            >  1:109857/1‑149 (MQ=255)                                                        gtcCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGaca                                                                                          <  6:242075/149‑1 (MQ=255)                                                               cgcCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTGGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACAGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGa                                                                                   <  2:17810/149‑1 (MQ=255)                                                                gctcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGAc                                                                                  >  7:282024‑M1/83‑149 (MQ=255)                                                                  tcgggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGAcc                                                                                 <  2:180879‑M1/68‑1 (MQ=255)                                                                    gggcaaatcgaccctggccaacgccctgcttggtctgttgccgggcaatgcacgcatcgaccaaggccagttatgggtCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGAccc                                                                                >  1:180879‑M1/79‑147 (MQ=255)                                                                    gCTGCAGCGCCTCGGCGATATGCTGGCCGATCCGTTGGGGGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGAGGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCAt                                                                              <  8:143132/149‑1 (MQ=255)                                                                     cTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCAt                                                                              >  8:108240/1‑148 (MQ=255)                                                                                cGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGt                                                                                                                                                >  8:241520/1‑73 (MQ=255)                                                                                cGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGt                                                                                                                                                <  7:241520/73‑1 (MQ=255)                                                                                 ggCGATTTGCTGGCCGATCCGTTGGGTGGGGTCGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGt                                                                 <  8:281245/149‑1 (MQ=255)                                                                                      tttGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATg                                                            <  3:272641/149‑1 (MQ=255)                                                                                        tGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGc                                                           <  7:67842/148‑1 (MQ=255)                                                                                          cTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGt                                                         <  2:20332/148‑1 (MQ=255)                                                                                           tGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGcc                                                                                                                                                      <  2:94279/56‑1 (MQ=255)                                                                                             gCCGATCCGTTCGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTAGCGCCATATCGACACCATCGACCCATAACTGGCCTTGTTCGATGCGTGCa                                                      <  6:229098/148‑1 (MQ=255)                                                                                               cGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTg                                                   <  7:108240/149‑1 (MQ=255)                                                                                                    cGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGccaaa                                              >  3:207782/1‑146 (MQ=255)                                                                                                     gTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGCGGGCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCg                                               >  1:242537/1‑149 (MQ=255)                                                                                                        gggtgggGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCaa                                           <  7:219666/148‑1 (MQ=255)                                                                                                         ggtgggGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCaa                                           >  2:74405/1‑147 (MQ=255)                                                                                                             gggTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGAcc                                     <  1:74405/149‑1 (MQ=255)                                                                                                                  gAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAg                                  >  4:242376/1‑147 (MQ=255)                                                                                                                     gCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGt                                                                 >  4:24071/1‑113 (MQ=255)                                                                                                                     gCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGt                                                                 <  3:24071/113‑1 (MQ=255)                                                                                                                                ggTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAgg                  >  6:188095/1‑149 (MQ=255)                                                                                                                                ggTCTTGCGGCACCAGGCCGAGGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGGGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAgg                  <  4:236928/149‑1 (MQ=255)                                                                                                                                 gTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAggg                 >  5:104659/1‑149 (MQ=255)                                                                                                                                       cGGGACCAGGCCGATGGTGCGCCCGC‑‑GCATCTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAGGGTCGAt            <  2:242537/148‑1 (MQ=255)                                                                                                                                        ggCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCTCGGCAACAGACCAAGCAGGGCGTTGGCCAGGGTCGAttt          <  2:109857/149‑1 (MQ=255)                                                                                                                                           aCCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAGGGTCGATTTGcc       >  6:231244/1‑149 (MQ=255)                                                                                                                                                gCCGATGGTGCGACCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCTTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGTCCAGGTTCGATTTGCCCGAGc  <  7:174960/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     AGGCCGACCTGGTCCAGCAGCGCCAGCACCTTGGCCTCTTGGCCTGGATAGCGTCGTCCACGCGCCAGCTGCAGCGCCTCGGCGATTTGCTGGCCGATCCGTTGGGTGGGGTTGAGGCTGACCATTGGGTCTTGCGGCACCAGGCCGATGGTGCGCCCGC‑‑GCAACTGGCGCCTGGCGCGTTCGCTGGCTTGCGCCATATCGACACCATCGACCCATAACTGGCCTTGGTCGATGCGTGCATTGCCCGGCAACAGACCAAGCAGGGCGTTGGCCAGGGTCGATTTGCCCGAGC  >  NC_002947/3655965‑3656256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.