New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3884913	54 (1.100)	4 (0.090)	4/248	NT	7.1%	coding (798/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	= 3884961	53 (1.150)					coding (846/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase

AGGCCGTTTCACGCGCCGCCCGCCTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCAC  >  NC_002947/3884768‑3885059                                                                                                                                                   |                                                                                                                                                   aGGCCGTTTCACGCGCCGCCCGCCTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTg                                                                                                                                                 >  3:120721/1‑149 (MQ=255)       tttCACGCGCCGCCCGCCTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GCGCCCGTCGATAACCCTGCAAGTGCAcgcg                                                                                                                                           >  6:141008/1‑149 (MQ=255)              cgccgcCCGCCTGACCCACCGCTTGATTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACACTGCAAGTCCACGCGGCCa                                                                                                                                       >  1:114040/1‑146 (MQ=255)                     cgccTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCtgtg                                                                                                                             <  3:184423/149‑1 (MQ=255)                      gccTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCtgtcg                                                                                                                            >  4:62189/1‑147 (MQ=255)                       ccTGACCCACCGCTTGCTTGCCTTCTCTTCTCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCTGGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTgg                                                                                                                            <  1:222625/149‑1 (MQ=255)                        cTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAg                                                                                                                                    >  8:183069/1‑139 (MQ=255)                            cccACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACG‑GGCCACAGGTCTTTGGccgcgtg                                                                                                                     <  5:176028/149‑6 (MQ=255)                             ccACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACG‑GGCCACAGGTCTTTGGccgcgtg                                                                                                                     >  6:176028/1‑143 (MQ=255)                              cACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGAc                                                                                                                                  >  7:272836/1‑135 (MQ=255)                              cACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGAc                                                                                                                                  <  8:272836/135‑1 (MQ=255)                               aCCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTgg                                                                                                                     >  4:79242/1‑147 (MQ=255)                               aCCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTgg                                                                                                                     <  3:79242/147‑1 (MQ=255)                                ccGGTTGCTTGCCTTCTCTTCGCTTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAgg                                                                                                                  <  2:114040/149‑1 (MQ=255)                                      gcttgcCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGAt                                                                                                             >  3:224302/1‑148 (MQ=255)                                       cttgcCTTCTCTTCCCTTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATg                                                                                                            <  2:223563/148‑1 (MQ=255)                                        ttgcCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAActgctggtcatccgcctccacgggccacaggtctttggccgc                                                                                                          >  5:244737‑M1/1‑107 (MQ=255)                                        ttgcCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGAc                                                                                                          >  1:149746/1‑149 (MQ=255)                                        ttgcCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGAc                                                                                                          >  3:166469/1‑149 (MQ=255)                                        ttgcCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGAc                                                                                                          >  8:106430/1‑149 (MQ=255)                                           ccTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACcag                                                                                                       >  1:254986/1‑149 (MQ=255)                                           ccTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACcag                                                                                                       <  2:176291/149‑1 (MQ=255)                                            cTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAActgctggtcatccgcctccacgggccacaggtctttggccgcgtg                                                                                                       >  2:143186‑M1/1‑103 (MQ=255)                                            cTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACcag                                                                                                       >  3:35134/1‑148 (MQ=255)                                                   tCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGttg                                                                                                 <  5:154691‑M2/147‑4 (MQ=255)                                                    cccGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAActgctggtcatccgcctccacgggccacaggtctttggccgcgtgcacttg                                                                                                 <  1:143186‑M1/146‑52 (MQ=255)                                                    cccGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGttgcag                                                                                              <  8:129560‑M2/149‑7 (MQ=255)                                                     ccGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGttgcag                                                                                              >  6:207531‑M2/1‑142 (MQ=255)                                                              gCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAActgctggtcatccgcctccacgggccacaggtctttggccgcgtgcacttgcagggttatcga                                                                                     <  6:244737‑M1/148‑64 (MQ=255)                                                              gCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTc                                                                                     <  4:224302/148‑1 (MQ=255)                                                               cTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGa                                                                                   >  7:154397/1‑149 (MQ=255)                                                                 gCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGAc                                                                                  >  4:3673/1‑148 (MQ=255)                                                                 gCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGAc                                                                                  >  4:51043/1‑148 (MQ=255)                                                                  cacaGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACaa                                                                                <  3:62189/149‑1 (MQ=255)                                                                           cGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTgctgct                                                                       <  4:120721/149‑1 (MQ=255)                                                                               taGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGTCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAAt                                                                   <  7:223469/149‑1 (MQ=255)                                                                               taGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAAt                                                                   >  5:84659/1‑149 (MQ=255)                                                                                aGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAAt                                                                   <  8:154397/148‑1 (MQ=255)                                                                                   ccTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgc                                                               <  2:149746/149‑1 (MQ=255)                                                                                      gCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGcgcgcg                                                            >  3:5556/1‑149 (MQ=255)                                                                                       cATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATgcgcgc                                                             <  7:106430/147‑1 (MQ=255)                                                                                        aTACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAg                                                          <  4:170052/149‑1 (MQ=255)                                                                                            cTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCa                                                      >  3:55804/1‑149 (MQ=255)                                                                                            cTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCa                                                      >  7:259874/1‑149 (MQ=255)                                                                                                    aGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAAc                                              <  2:254986/149‑1 (MQ=255)                                                                                                       cAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGt                                           <  3:3673/149‑1 (MQ=255)                                                                                                        aGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGTACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTg                                          <  7:210763/149‑1 (MQ=255)                                                                                                        aGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGGACGCGGCCAATGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACGTGCTGATCAATGCGCGCGAGGCCATGCCCAACGGTg                                          <  6:205412/149‑1 (MQ=255)                                                                                                        aGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAAcag                                            >  5:92753/1‑145 (MQ=255)                                                                                                        aGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAAcag                                            <  6:92753/147‑3 (MQ=255)                                                                                                               cTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGc                                    >  8:282342/1‑148 (MQ=255)                                                                                                                  ggCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTa                                  <  4:55804/147‑1 (MQ=255)                                                                                                                      cTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATc                            <  7:129560/149‑1 (MQ=255)                                                                                                                       tCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACACCCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATc                            >  8:75693/1‑148 (MQ=255)                                                                                                                       tCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTg                                     >  3:147002/1‑139 (MQ=255)                                                                                                                       tCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTg                                     <  4:147002/139‑1 (MQ=255)                                                                                                                         gCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAg                         <  4:5556/149‑1 (MQ=255)                                                                                                                               aGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCg                      <  6:154691/147‑1 (MQ=255)                                                                                                                                 cccGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACa                  <  7:282342/149‑1 (MQ=255)                                                                                                                                    gTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatc               <  4:35134/149‑1 (MQ=255)                                                                                                                                     tCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCGGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatca              <  4:166469/149‑1 (MQ=255)                                                                                                                                     tCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGttgcagggttatcgacgggctcaggcgagcgcccaggcgttctgccttgagcaaggtatgcaggtctatacgttggctgtgcagc               <  6:244737‑M2/148‑86 (MQ=255)                                                                                                                                       gATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcatc            <  3:51043/149‑1 (MQ=255)                                                                                                                                              cTGCAActgctggtcatccgcctccacgggccacaggtctttggccgcgtgcacttgcagggttatcgacgggctcaggcgagcgcccaggcgttctgccttgagcaaggtatgcaggtctatacgttggctgtgcagcgattgacggg     <  8:129560‑M1/149‑144 (MQ=255)                                                                                                                                              cTGCAActgctggtcatccgcctccacgggccacaggtctttggccgcgtgcacttgcagggttatcgacgggctcaggcgagcgcccaggcgttctgccttgagcaaggtatgcaggtctatacgttggctgtgcagcgattgacgg      >  6:207531‑M1/1‑6 (MQ=255)                                                                                                                                                 cAActgctggtcatccgcctccacgggccacaggtctttggccgcgtgcacttgcagggttatcgacgggctcaggcgagcgcccaggcgttctgccttgagcaaggtatgcaggtctatacgttggctgtgcagcgattgacggga    <  5:154691‑M1/147‑145 (MQ=255)                                                                                                                                                 cAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGttgcagggttatcgacgggctcaggcgagcgcccaggcgttctgccttgagcaaggtatgcaggtctatacgttggctgtgcagcgattgacggg     <  1:143186‑M2/146‑96 (MQ=255)                                                                                                                                                 cAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCAc  >  5:309283/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   AGGCCGTTTCACGCGCCGCCCGCCTGACCCACCGCTTGCTTGCCTTCTCTTCCCGTCAATCGCTGCACAGCCAACGTATAGACCTGCATACCTTGCTCAAGGCAGAACGCCTGGGCGCTCGCCT‑GAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCAC  >  NC_002947/3884768‑3885059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.