| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4647557 = | 26 (0.530) | 8 (0.230) | 7/184 | NT | 30.1% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4647665 = | 19 (0.550) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
TGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTC > NC_002947/4647412‑4647679 | tGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCtgt > 5:128928/1‑149 (MQ=255) tcgattattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCtgt > 3:148813‑M1/145‑148 (MQ=255) attattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCg < 6:3077‑M1/8‑1 (MQ=255) attattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCg > 5:52682‑M1/142‑149 (MQ=255) ttattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgcgaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcagtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCgg < 1:215756‑M1/9‑1 (MQ=255) ttattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCg > 2:306402‑M1/141‑148 (MQ=255) ttCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGcc > 7:29269/1‑149 (MQ=255) tattcggccgttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGc < 7:230597‑M1/10‑1 (MQ=255) ggCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCctct > 4:131286/1‑149 (MQ=255) gttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCTGGCCTCTTcgcg < 6:210336‑M1/19‑1 (MQ=255) ttgcggcgctgaaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCgg < 6:162727‑M1/20‑1 (MQ=255) gATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAAcc < 6:128928/148‑1 (MQ=255) cgcTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTc > 3:194426/1‑149 (MQ=255) aaaaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCg > 2:183497‑M1/119‑147 (MQ=255) aaccctgcgcgagcgctatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTTAACccgcggc < 4:135564‑M1/33‑4 (MQ=255) gATGTCCCAGGGCCGGGCCAGCTTCTCCATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGAGAGCATTGCCTATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGTCCTCTTCGCTGGTAAACCCGCTCCTa < 6:22633/147‑1 (MQ=255) gATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 3:123249/148‑1 (MQ=255) gATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGACGCCCAGGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGACTCTTCGCGGGTAAACCCGCTCCTa > 1:84041/1‑148 (MQ=255) cAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCCCGGGTAAACCCGCAACTACAGGCTggg > 8:54991/1‑148 (MQ=255) gggccgggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCg > 7:138004/1‑149 (MQ=255) tatgccaaggcgggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAg < 5:42804‑M1/49‑1 (MQ=255) cgggccAGCTTCTCGATGGAGTTCACCCGCTCTGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAgg < 7:111543/149‑1 (MQ=255) ccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGACCC‑CGGCCAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCAACTACAGGAAGGCCGCACGccc > 1:202033/1‑148 (MQ=39) cAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGc < 1:297019/145‑1 (MQ=255) cAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGc > 2:297019/1‑145 (MQ=255) aGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCaaa < 3:66049/149‑1 (MQ=255) ggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAAc > 2:77097‑M1/89‑114 (MQ=255) ggcaagcatttgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAAc < 1:77097‑M1/26‑1 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATtg < 2:84041/146‑1 (MQ=255) tGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTTAAACCGCTACTAAAGGGTGGCCGCCGGCCCAAACATTGTgggc > 1:255320/1‑149 (MQ=39) gTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGccccc < 4:194426/149‑1 (MQ=255) gTTCACCCGCTATGCCGAGGCAC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGccccc > 5:33956/1‑149 (MQ=255) tgcgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGccccc > 6:42804‑M1/79‑148 (MQ=255) cgcgtggtgcatttgtcggagcggtgcaagaagctgttgaagcgggcgggctagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCt > 7:271564‑M1/77‑148 (MQ=255) tGCCGAGGCAC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg < 6:33956/149‑1 (MQ=255) atttgtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCggg > 5:162727‑M1/67‑149 (MQ=255) aGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTa < 3:131286/149‑1 (MQ=255) gtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggcCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAg > 2:228913‑M1/63‑138 (MQ=255) gtcggagcggtgcaagaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggcCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAg < 1:228913‑M1/76‑1 (MQ=255) ccc‑cGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAccc < 8:138004/149‑1 (MQ=255) gCGAGCATGGCCTATGGCATCGTCAAGAAGACCCGCGGGGAGTACGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGaa < 8:29269/149‑1 (MQ=255) gaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAg > 7:137171‑M1/48‑123 (MQ=255) gaagctgttgaagcgggcgggcgagcagcattgaaaactgttgcggtCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAg < 8:137171‑M1/76‑1 (MQ=255) tCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg > 3:259508/1‑117 (MQ=255) tCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg < 4:259508/117‑1 (MQ=255) atccccGCGGGGTGTAAGGGTTTCTGCTGTGCGGGCCTCTTGGGGGTTAACCCGGCTCCTACTGCATGGCCGCAGGCCCATACTTTGTTGCCCCCCGTGTTGGTGGGGTTTTACCCGCGAAGTGGCCGGCACAGACCGCAACAGTTTTc < 2:202033/145‑1 (MQ=255) ccGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTTAAACCGCTCCTACAGTATGGCCGCAGGGCCAAACAATGTTCGCCCCCCAGTATGAGCGGGTTTACACGCGAagat > 3:44527/1‑119 (MQ=25) | TGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCC‑CGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTC > NC_002947/4647412‑4647679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |