New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4889569 =70 (1.430)7 (0.180) 4/208 NT 15.1% intergenic (+15/‑138) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 4889660 = 23 (0.590)intergenic (+106/‑47) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase

GCGAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGC  >  NC_002947/4889421‑4889711
                                                                                                                                                    |                                                                                                                                              
gCGAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGAc                                                                                                                                                >  5:88056/1‑149 (MQ=255)
   tggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCt                                                                                                                                             >  6:18271‑M1/146‑149 (MQ=255)
   tggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCt                                                                                                                                             >  3:214410‑M1/146‑149 (MQ=255)
   tggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCt                                                                                                                                             <  3:143153‑M1/4‑1 (MQ=255)
   agaTCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCt                                                                                                                                             <  6:34898/149‑1 (MQ=255)
       gggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggacCCCTGTgg                                                                                                                                         <  6:70220‑M1/8‑1 (MQ=255)
        aaCTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                         <  2:214632/148‑1 (MQ=255)
             ccGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCCCCACCGAAGCGGGCCTGGGCTGGCTGAAAACCAACAACTCAATCTGAGGAACCACTCTGGACCCGATGGGAGCgg                                                                                                                                   >  8:261948/1‑149 (MQ=255)
             ccGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                         <  6:100794/143‑1 (MQ=255)
             ccGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                         >  5:100794/1‑143 (MQ=255)
             ccGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCg                                                                                                                                    <  6:88056/148‑1 (MQ=255)
             aaatgaagaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCg                                                                                                                                    >  8:200206‑M1/136‑148 (MQ=255)
             aaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCgg                                                                                                                                   >  6:252118‑M1/136‑149 (MQ=255)
              cGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGTGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCggg                                                                                                                                  <  4:288423/149‑1 (MQ=255)
              aatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCggg                                                                                                                                  >  2:212533‑M1/135‑149 (MQ=255)
               gCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGc                                                                                                                                 <  4:93227/149‑1 (MQ=255)
                cTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCt                                                                                                                                <  7:49602/149‑1 (MQ=255)
                cTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCt                                                                                                                                >  3:202811/1‑149 (MQ=255)
                 gaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTc                                                                                                                               <  7:167312‑M1/18‑1 (MQ=255)
                   acaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgttatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGc                                                                                                                             >  6:232632‑M1/130‑149 (MQ=255)
                      gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcg                                                                                                                          >  2:241460/1‑149 (MQ=255)
                       ttCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc                                                                                                                         <  4:202811/149‑1 (MQ=255)
                          gtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcgcg                                                                                                                        <  8:107051‑M1/25‑1 (MQ=255)
                          gAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGaa                                                                                                                      >  6:174649/1‑149 (MQ=255)
                          gAACACCTGGACCGCATTGGCTACCAGGGCTGGGGGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGa                                                                                                                       <  7:276/148‑1 (MQ=255)
                             cacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAacac                                                                                                                   <  5:299092/149‑1 (MQ=255)
                             cacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCGAGCCcgctcccac                                                                                                                   <  3:91435/149‑7 (MQ=255)
                                cTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCgg                                                                                                                >  2:141430/1‑149 (MQ=255)
                                 tGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGc                                                                                                               >  6:249305/1‑149 (MQ=255)
                                   gACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGACCACCGGCa                                                                                                              >  7:47343/1‑148 (MQ=255)
                                   gACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCa                                                                                                              >  8:89923/1‑148 (MQ=255)
                                    aCCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCaaa                                                                                                            >  2:65142/1‑149 (MQ=255)
                                      cGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGc                                                                                                          >  3:11615/1‑149 (MQ=255)
                                          ttGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                      <  8:47343/149‑1 (MQ=255)
                                          ttGGCTACCAGGGCTGGGGGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                      <  8:267110/149‑1 (MQ=255)
                                                 ccAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATc                                                                                                >  1:233488/1‑148 (MQ=255)
                                                    gggCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAcc                                                                                            >  7:205975/1‑149 (MQ=255)
                                                    ccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAcc                                                                                            <  2:220156‑M1/53‑1 (MQ=255)
                                                    ccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAcc                                                                                            <  2:207812‑M1/53‑1 (MQ=255)
                                                       cTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAg                                                                                         <  4:11615/149‑1 (MQ=255)
                                                          ggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGcc                                                                                                                            >  2:233392/1‑111 (MQ=255)
                                                          ggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGcc                                                                                                                            <  1:233392/111‑1 (MQ=255)
                                                          ggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTg                                                                                      >  5:51724/1‑149 (MQ=255)
                                                           gtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGt                                                                                     <  2:233488/149‑1 (MQ=255)
                                                              ggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTg                                                                                  <  1:141430/149‑1 (MQ=255)
                                                               gcgcGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCAAAGCCGGGGACATCCACCGAGTTGTCTGc                                                                                 >  3:226084/1‑149 (MQ=255)
                                                                      tgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          >  5:8129‑M1/79‑149 (MQ=255)
                                                                      gTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGCACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          >  7:52296/1‑149 (MQ=255)
                                                                       tACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACAACGGCAAAGCCGGTGCCATCCACCGACTTTTCTGCTTCGCcgg                                                                         >  7:144879/1‑149 (MQ=255)
                                                                        ccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCggg                                                                         >  1:220156‑M1/77‑148 (MQ=255)
                                                                        ccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCggg                                                                         >  1:207812‑M1/77‑148 (MQ=255)
                                                                         cAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                      >  5:190787/1‑118 (MQ=255)
                                                                         cAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                      <  6:190787/118‑1 (MQ=255)
                                                                         cAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGc                                                                        <  6:51724/148‑1 (MQ=255)
                                                                          aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAACGCCGGTGCCATCCACCGAGTTGGCTGCTTCGCGGGc                                                                        >  7:79674/1‑147 (MQ=255)
                                                                          aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCgc                                                                      >  7:83983/1‑148 (MQ=255)
                                                                          aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCGCGCCCGCCCACACCGGCAAAGCCGGTGCCCTCCACCGAGGTGGGTGCTTAGCgggggc                                                                      >  3:7799/1‑146 (MQ=37)
                                                                              cGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          <  7:219342/141‑1 (MQ=255)
                                                                              cGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          >  8:219342/1‑141 (MQ=255)
                                                                              cGCTGAACACCACCGAAGCGGGCCTGGGCTGGCTTAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTGCGCGGGCGAGccc                                                                  <  7:261948/149‑1 (MQ=255)
                                                                                   accaccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCCGCAAAGCCGGTGCCCTCCACTGAGTTGTCTGCTTCGCGGGCGAGCCCGCTcc                                                             >  5:70220/1‑149 (MQ=255)
                                                                                     caccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGGCATCCACCGAGTTGTCTGGTTAGCGGGCGAGCCCGCGCCca                                                           >  1:116833/1‑149 (MQ=255)
                                                                                     caccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTc                                                              <  4:200214/146‑1 (MQ=255)
                                                                                     caccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTc                                                              >  3:200214/1‑146 (MQ=255)
                                                                                      accaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCca                                                           >  7:60684/1‑148 (MQ=255)
                                                                                           cGAAGCGGGCCTGGGCTGGCTGAAACCCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgggg                                                     <  5:249305/149‑1 (MQ=255)
                                                                                            gAAGCGGGCCTTGGCTGGCTGAAAACCCTCAACTCAATCTTAGGATCAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACTCCGGCAAAGCGGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                    <  4:226084/149‑1 (MQ=37)
                                                                                             aaGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATc                                                                                                <  4:45448/104‑1 (MQ=255)
                                                                                              aGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGc                                                   <  5:78349/148‑1 (MQ=255)
                                                                                              aGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGc                                                   >  6:78349/1‑148 (MQ=255)
                                                                                                       gggCTGGCGGAAACCCCACAACGCTATCTGAGCAACAACTCGGGACGCTGTGGGAGCGGGCTCGCCGGCGAACACCTTCAAAGCCGGTGCCATCCACCGATTTGTGTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgc                                         <  8:205975/149‑1 (MQ=255)
                                                                                                          ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGcttgcttg                                      <  7:89923/149‑1 (MQ=255)
                                                                                                               tgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTAGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGata                                 >  7:33135/1‑149 (MQ=255)
                                                                                                                gAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                          >  4:259946/1‑139 (MQ=255)
                                                                                                                gAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttg                                          <  3:259946/139‑1 (MQ=255)
                                                                                                                       cacaACGCAATCTGAGTAACAAGTCGGGACCCTGTGGTAGCGGGCTCGCCCGCTAACACCGGCAAAGCCGGTGCCATCCACCGTGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAAtt                         <  8:33135/149‑1 (MQ=37)
                                                                                                                       cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCTAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATca                              <  2:13724/144‑1 (MQ=255)
                                                                                                                       cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATca                              >  1:13724/1‑144 (MQ=255)
                                                                                                                          aaCGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa                                                                                          >  4:114007/1‑81 (MQ=255)
                                                                                                                          aaCGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa                                                                                          <  3:114007/81‑1 (MQ=255)
                                                                                                                            tgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          >  4:249243‑M1/25‑95 (MQ=255)
                                                                                                                            tgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                          <  3:249243‑M1/71‑1 (MQ=255)
                                                                                                                            cGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGc                                                                        <  2:268980/97‑1 (MQ=255)
                                                                                                                             gCAATCTGAGGAACAACTCGGGACCCTGTGGGAGGGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCAGAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAag                   <  1:208278/149‑1 (MQ=255)
                                                                                                                               aaTCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCTAAGCTTGCTTGAGATATCACAATTACAAagag                 >  5:134747/1‑149 (MQ=255)
                                                                                                                               aaTCTGAGCACCAACTGGGCACCCGGGGGTAGGGGGCTCCCCCGCTAACCCGGTCAACGCGGGTGCAATCCCCCTTTTTGTCTGCTTCGGGGCCTTGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAagag                 <  2:116833/149‑1 (MQ=255)
                                                                                                                                          caacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGGGCCATCCCCCGAGTTGTCTGCTTCGCGGGCGCGCCCGCTCCCCCAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCa      >  5:168568/1‑149 (MQ=255)
                                                                                                                                             cTCGGGACCCTGTGGGAGCGGGCTCGCCCGCTAACACGGGAAAAGCCGTTGCCATCCACCGATTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATgg   <  5:174649/149‑1 (MQ=255)
                                                                                                                                              tCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATACACCGAGTTGTATGCTTAGCGGGCGAGCCCGCTACCACAGGGGGCCAAAGCTTGCTTGAGATATAACAATTAAAAAGACGTAATTTATCATGGc  >  4:128461/1‑149 (MQ=25)
                                                                                                                                                 gccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTcg                                                                             >  7:130258‑M1/4‑71 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
GCGAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGC  >  NC_002947/4889421‑4889711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.