New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4898669 =	44 (0.900)	3 (0.060)	3/254	NT	6.4%	coding (800/924 nt)	PP_4307	DMT superfamily permease
	?	NC_002947	4898693 =	45 (0.950)					coding (776/924 nt)	PP_4307	DMT superfamily permease

CAGGCTGGCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCGGTGTGCACCATACCCA  >  NC_002947/4898523‑4898816                                                                                                                                                   |                                                                                                                                                    cAGGCTGGCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAgcggc                                                                                                                                                   <  3:122199/149‑1 (MQ=255)  aGGCTGGCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAgcggcg                                                                                                                                                  >  5:161573/1‑149 (MQ=255)    gCTGGCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGgcgc                                                                                                                                                 >  8:6451/1‑148 (MQ=255)        gCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGc                                                                                                                                            <  8:208578/149‑1 (MQ=255)        gCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGc                                                                                                                                            >  7:208578/1‑149 (MQ=255)         cAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCg                                                                                                                                           <  6:161573/149‑1 (MQ=255)                 ggCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCg                                                                                                                                    >  1:204195/1‑148 (MQ=255)                   cATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAAc                                                                                                                                 >  1:166821/1‑149 (MQ=255)                            ttGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCAACCCCCACCCACACTATCCGCGCCAGGCGGTGGCCCAACGCCACCCac                                                                                                                        >  3:303092/1‑148 (MQ=255)                              gCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGt                                                                                                                       <  7:223867/148‑1 (MQ=255)                               cGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCCCCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGCACGCCACCCAGTcc                                                                                                                     >  1:124051/1‑149 (MQ=255)                               cGGGCCTCTTCGCGGGTAAACCCGCACCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTcc                                                                                                                     <  4:131013/149‑1 (MQ=255)                                  cacaccggcctgatgtatgtactgttgtacagcgccatccagcgtttgcccacggccttgaccggtgcgctgtcgttcatttactagattgcggcaattctggtggactgggtGGCGCCAGGCGGTGCCCGAACGCCACCCAGTccac                                                                                                                   >  1:91348‑M1/114‑148 (MQ=255)                                    ctctTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTccac                                                                                                                   >  6:210559/1‑146 (MQ=255)                                       cggcctgatgtatgtactgttgtacagcgccatccagcgtttgcccacggccttgaccggtgcgctgtcgttcatttacccgattgcggcaattctggtggactgggtGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGa                                                                                                               <  6:250342‑M1/39‑1 (MQ=255)                                       cggcctgatgtatgtactgttgtacagcgccatccagcgtttgcccacggccttgaccggtgcgctgtcgttcatttacccgattgcggcaattctggtggactgggtGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGa                                                                                                               >  5:250342‑M1/109‑147 (MQ=255)                                         cgcgGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGaa                                                                                                              <  2:166821/146‑1 (MQ=255)                                         cgcgGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTg                                                                                                           >  6:243015/1‑149 (MQ=255)                                           cgGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGcc                                                                                                         <  6:57118/149‑1 (MQ=255)                                             ggTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCAGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCCGGCGGTGCCCGCACGCCACCCCGTCCACCAGAAATGCCg                                                                                                        >  4:151248/1‑148 (MQ=255)                                                 aaCCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAAt                                                                                                    <  5:243015/148‑1 (MQ=255)                                                   cccGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCgg                                                                                                 >  8:18824/1‑149 (MQ=255)                                                       cgcCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTaa                                                                                             <  2:204195/149‑1 (MQ=255)                                                        gcCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTaaa                                                                                            <  7:18824/149‑1 (MQ=255)                                                                         ccGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCg                                                                           <  3:151248/149‑1 (MQ=255)                                                                           gAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCgg                                                                          >  2:292665/1‑148 (MQ=255)                                                                                gAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAgg                                                                    >  5:69719/1‑149 (MQ=255)                                                                                gAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCCGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAgg                                                                    >  7:10460/1‑149 (MQ=255)                                                                                       caccCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCCCCCCCCGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCCCCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGGCAAGGCCGTggg                                                             >  4:302899/1‑149 (MQ=255)                                                                                       caccCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTggg                                                             <  1:115614/149‑1 (MQ=255)                                                                                        accCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTggg                                                             >  3:107176/1‑148 (MQ=255)                                                                                             tgctgcATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCg                                                                           >  8:104386/1‑129 (MQ=255)                                                                                             tgctgcATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCg                                                                           <  7:104386/129‑1 (MQ=255)                                                                                               ctgcATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGc                                                      <  6:89328/148‑1 (MQ=255)                                                                                                  cATGCCCGCTGCCGCCAGCAGGATCAACCCCCCCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGa                                                  >  7:251030/1‑149 (MQ=255)                                                                                                     gCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATgg                                               >  6:62208/1‑149 (MQ=255)                                                                                                             ccgccAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGt                                         <  7:6451/147‑1 (MQ=255)                                                                                                             ccgccAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTa                                        <  7:231413/148‑1 (MQ=255)                                                                                                             ccgccAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTa                                        >  2:296502/1‑148 (MQ=255)                                                                                                                      ggATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGtaca                              <  6:69719/149‑1 (MQ=255)                                                                                                                       gATCAACCCCACCACCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGAGCACCGGTCAAGGCCCTGCGCAAACGCTGTATGGCGCTGTACAACAGtaca                              >  1:302607/1‑148 (MQ=255)                                                                                                                          cAACCCCACACCCACCCACTGTAGCGGCGCCAGGCGGAGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCCCACCCGTCAAGCCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGtacatac                           >  6:114573/1‑148 (MQ=255)                                                                                                                            accccaccccCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATc                        <  8:10460/149‑1 (MQ=255)                                                                                                                             ccccaccccCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAATGCTGGATGGCGCTGTACAACAGTACATACATCa                       <  1:193280/149‑1 (MQ=255)                                                                                                                                caccccCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTacatacat                         <  2:71353/144‑1 (MQ=255)                                                                                                                                caccccCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTacatacat                         >  1:71353/1‑144 (MQ=255)                                                                                                                                 accccCAGCGACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGcc                   <  4:303092/149‑1 (MQ=255)                                                                                                                                   ccccAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAAAGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCgg                 >  1:182112/1‑149 (MQ=255)                                                                                                                                     ccAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCgggt               >  7:47630/1‑147 (MQ=255)                                                                                                                                          cACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCGGTGTGCAc          >  6:117797/1‑149 (MQ=255)                                                                                                                                                aGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAgg                     >  7:291373/1‑132 (MQ=255)                                                                                                                                                aGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAgg                     <  8:291373/132‑1 (MQ=255)                                                                                                                                                 gcggcgCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCGGTGTGCACCATAccc   <  2:124051/149‑1 (MQ=255)                                                                                                                                                  cggcgCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCGGTGTGCACCATACCCa  <  4:107176/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CAGGCTGGCAAAAAGCGGCATTCTACCTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTACAGGATGCCGCGCCGAGCGGAACCACCACCCCTGCTGCATGCCCGCTGCCGCCAGCAGGATCAACCCCACCCCCAGCCACTGTAGCGGCGCCAGGCGGTGCCCGAACGCCACCCAGTCCACCAGAATTGCCGCAATCGGGTAAATGAACGACAGCGCACCGGTCAAGGCCGTGGGCAAACGCTGGATGGCGCTGTACAACAGTACATACATCAGGCCGGTGTGCACCATACCCA  >  NC_002947/4898523‑4898816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.