New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4956698 =	49 (1.000)	6 (0.130)	5/248	NT	11.8%	coding (57/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	4956743 =	43 (0.930)					coding (12/1374 nt) coding (775/792 nt)	fliI fliH	flagellum‑specific ATP synthase flagellar assembly protein FliH

GGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGT  >  NC_002947/4956552‑4956839                                                                                                                                                   |                                                                                                                                              gggTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGcc                                                                                                                                             <  3:187134/149‑1 (MQ=255) ccacagccgtatcgatgccaccatggaaacgcgtatcgaaaaagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGcc                                                                                                                                             >  1:16073‑M1/147‑149 (MQ=255) ccacagccgtatcgatgccaccatcgaaacgcgtatcgaaaaagcggtgacgcagctggtcgaccagttgcacgatcattccctgcacccggcgccgacagacagttcgatagaccaggacgcgccggccgcgcgtgccgtggacaGcc                                                                                                                                             <  5:236725‑M1/3‑1 (MQ=255)  cacagccgtatcgatgccaccatggaaacgcgtatcgaaaaagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGccc                                                                                                                                            >  2:33307‑M1/146‑149 (MQ=255)    tGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAg                                                                                                                                          <  1:48938/149‑1 (MQ=255)          tatcgatgccaccatggaaacgcgtatcgaaaaagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCtt                                                                                                                                    <  7:220330‑M1/12‑1 (MQ=255)                tgccaccatggaaacgcgtatcgaaaaagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCg                                                                                                                                <  4:124135‑M1/16‑1 (MQ=255)                tCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCg                                                                                                                                >  8:232902/1‑147 (MQ=255)                  gTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGc                                                                                                                            >  7:29904/1‑149 (MQ=255)                   ttGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACTCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCtt                                                                                                                                    <  1:33672/140‑1 (MQ=255)                   ttGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACTCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCtt                                                                                                                                    >  2:33672/1‑140 (MQ=255)                     gATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTgg                                                                                                                         >  1:203421/1‑149 (MQ=255)                      aTCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGt                                                                                                                        <  7:232902/149‑1 (MQ=255)                      aTCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGt                                                                                                                        <  3:165044/149‑1 (MQ=255)                      aTCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGt                                                                                                                        <  1:33006/149‑1 (MQ=255)                        cACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCtt                                                                                                                                    <  5:70424/135‑1 (MQ=255)                        cACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCtt                                                                                                                                    >  6:70424/1‑135 (MQ=255)                          ccAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGt                                                                                                                    >  6:273933/1‑149 (MQ=255)                              gCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCaa                                                                                                                <  6:139666/149‑1 (MQ=255)                                 gCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGccc                                                                                                                                            >  4:168969/1‑118 (MQ=255)                                 gCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGccc                                                                                                                                            <  3:168969/118‑1 (MQ=255)                                         aaagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTgg                                                                                                     >  8:232259‑M1/107‑149 (MQ=255)                                          cACTGGTGCGCGCAGGCCTTCTGCTTGCAGGGTGAGGCAGACCATACGGAGCAAGGGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTggg                                                                                                    <  8:29904/149‑1 (MQ=255)                                          cACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTggg                                                                                                    <  5:60085/149‑1 (MQ=255)                                          aagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTggg                                                                                                    >  8:147665‑M1/106‑149 (MQ=255)                                          aagcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTggg                                                                                                    >  3:124135‑M1/106‑149 (MQ=255)                                           aCTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGc                                                                                                   <  3:79217/149‑1 (MQ=255)                                            gcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCt                                                                                                  >  8:220330‑M1/104‑149 (MQ=255)                                                  cgcgcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTcc                                                                                              <  5:273933/147‑1 (MQ=255)                                                  acgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCAc                                                                                            >  5:284551‑M1/98‑149 (MQ=255)                                                     gcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACgg                                                                                          >  8:188068/1‑148 (MQ=255)                                                     gcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACgg                                                                                          >  4:135375/1‑148 (MQ=255)                                                         gccgtaggCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGTCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACg                                                                                      <  5:101895/142‑1 (MQ=255)                                                           cTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGTCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCCGTCCACGGCACGCTc                                                                                   >  3:185667/1‑149 (MQ=255)                                                           cTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTc                                                                                   >  8:50263/1‑149 (MQ=255)                                                            ttCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcg                                                                                  >  4:88311/1‑149 (MQ=255)                                                             tCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcgg                                                                                 >  2:70456/1‑149 (MQ=255)                                                                gCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcggccg                                                                              >  5:222318/1‑149 (MQ=255)                                                                    ccAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGgcgc                                                                          >  7:31944/1‑149 (MQ=255)                                                                        ggTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTc                                                                       >  6:7807/1‑148 (MQ=255)                                                                                 gACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATc                                                             <  1:70456/149‑1 (MQ=255)                                                                                  aCCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCg                                                            <  3:135375/149‑1 (MQ=255)                                                                                      tACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACAt                                                        >  1:46979/1‑149 (MQ=255)                                                                                                        cgacgaTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGt                                       <  6:222318/148‑1 (MQ=255)                                                                                                         gacgaTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTg                                      >  1:256090/1‑148 (MQ=255)                                                                                                                ggctgggcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGaa                               <  2:256090/148‑1 (MQ=255)                                                                                                                ggctgggcCGGCAGCTCGATGGCCTCAGCGTAAGAGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGaa                               <  8:221767/148‑1 (MQ=255)                                                                                                                   tgcgcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCATCCCGAAGATGGTGCCTTCAACGCGCATCAGGGCTGTCAACGGCACTCTCAGCCGCCGCGTCCAGGTCAATCGACATGTCTCGCTCCGCCGGGTGAAGCGAATGaa                           >  4:264163/4‑148 (MQ=255)                                                                                                                      gcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGTCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                        <  2:203421/149‑1 (MQ=255)                                                                                                                      gcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                        <  7:50263/149‑1 (MQ=255)                                                                                                                           cAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAAc                   <  8:31944/149‑1 (MQ=255)                                                                                                                              cTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTgg                <  7:188068/149‑1 (MQ=255)                                                                                                                                 gATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTc              <  2:37415/148‑1 (MQ=255)                                                                                                                                  aTGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACACTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGCGTGCAGGGAATGATCGTGCAACTGGTCg             >  5:107729/1‑148 (MQ=255)                                                                                                                                    ggCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGaa           >  3:7781/1‑148 (MQ=255)                                                                                                                                     gCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAAc          <  5:7807/148‑1 (MQ=255)                                                                                                                                     gCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACa         <  4:185667/149‑1 (MQ=255)                                                                                                                                      ccTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGa                            >  2:59978/1‑129 (MQ=255)                                                                                                                                      ccTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGa                            <  1:59978/129‑1 (MQ=255)                                                                                                                                       cTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGATCAAGGCGCATCTGGGCAGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCGATCGAAAAGTCTGGCGCCGCCGGGTGCGGGGAATGATCCTGCAACTGGTCGAAAAg        >  6:236725/1‑148 (MQ=255)                                                                                                                                          aGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACACTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGc    <  6:107729/149‑1 (MQ=255)                                                                                                                                            cGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGt  <  4:280293/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                              GGGTGATAACTGTCATCGTTGATCACCAGGCAGCGGCTGCCCACTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGT  >  NC_002947/4956552‑4956839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.