New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4956698 =	49 (1.000)	6 (0.130)	5/248	NT	11.8%	coding (57/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	4956743 =	43 (0.930)					coding (12/1374 nt) coding (775/792 nt)	fliI fliH	flagellum‑specific ATP synthase flagellar assembly protein FliH

CTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATACGGCTGTGG  >  NC_002947/4956595‑4956888                                                                                                                                                     |                                                                                                                                                  gcggtgacgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCt                                                                                                                                                   >  8:220330‑M1/104‑149 (MQ=255)       cgcgcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTcc                                                                                                                                               <  5:273933/147‑1 (MQ=255)       acgcagctgttcgaccagttgcacgatcattccctgcacccggcggcgccagacatgtcgatagacctggacgcgccggccgagcgtgccgtggacaGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCAc                                                                                                                                             >  5:284551‑M1/98‑149 (MQ=255)          gcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACgg                                                                                                                                           >  4:135375/1‑148 (MQ=255)          gcAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACgg                                                                                                                                           >  8:188068/1‑148 (MQ=255)              gccgtaggCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGTCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACg                                                                                                                                       <  5:101895/142‑1 (MQ=255)                cTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGTCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCCGTCCACGGCACGCTc                                                                                                                                    >  3:185667/1‑149 (MQ=255)                cTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTc                                                                                                                                    >  8:50263/1‑149 (MQ=255)                 ttCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcg                                                                                                                                   >  4:88311/1‑149 (MQ=255)                  tCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcgg                                                                                                                                  >  2:70456/1‑149 (MQ=255)                     gCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTcggccg                                                                                                                               >  5:222318/1‑149 (MQ=255)                         ccAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGgcgc                                                                                                                           >  7:31944/1‑149 (MQ=255)                             ggTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTc                                                                                                                        >  6:7807/1‑148 (MQ=255)                                      gACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATc                                                                                                              <  1:70456/149‑1 (MQ=255)                                       aCCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCg                                                                                                             <  3:135375/149‑1 (MQ=255)                                           tACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACAt                                                                                                         >  1:46979/1‑149 (MQ=255)                                                             cgacgaTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGt                                                                                        <  6:222318/148‑1 (MQ=255)                                                              gacgaTGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTg                                                                                       >  1:256090/1‑148 (MQ=255)                                                                     ggctgggcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGaa                                                                                <  2:256090/148‑1 (MQ=255)                                                                     ggctgggcCGGCAGCTCGATGGCCTCAGCGTAAGAGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGaa                                                                                <  8:221767/148‑1 (MQ=255)                                                                        tgcgcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCATCCCGAAGATGGTGCCTTCAACGCGCATCAGGGCTGTCAACGGCACTCTCAGCCGCCGCGTCCAGGTCAATCGACATGTCTCGCTCCGCCGGGTGAAGCGAATGaa                                                                            >  4:264163/4‑148 (MQ=255)                                                                           gcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGTCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                                                                         <  2:203421/149‑1 (MQ=255)                                                                           gcCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                                                                         <  7:50263/149‑1 (MQ=255)                                                                                cAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAAc                                                                    <  8:31944/149‑1 (MQ=255)                                                                                   cTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTgg                                                                 <  7:188068/149‑1 (MQ=255)                                                                                      gATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTc                                                               <  2:37415/148‑1 (MQ=255)                                                                                       aTGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACACTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGCGTGCAGGGAATGATCGTGCAACTGGTCg                                                              >  5:107729/1‑148 (MQ=255)                                                                                         ggCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGaa                                                            >  3:7781/1‑148 (MQ=255)                                                                                          gCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAAc                                                           <  5:7807/148‑1 (MQ=255)                                                                                          gCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACa                                                          <  4:185667/149‑1 (MQ=255)                                                                                           ccTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGa                                                                             >  2:59978/1‑129 (MQ=255)                                                                                           ccTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGa                                                                             <  1:59978/129‑1 (MQ=255)                                                                                            cTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGATCAAGGCGCATCTGGGCAGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCGATCGAAAAGTCTGGCGCCGCCGGGTGCGGGGAATGATCCTGCAACTGGTCGAAAAg                                                         >  6:236725/1‑148 (MQ=255)                                                                                               aGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACACTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGc                                                     <  6:107729/149‑1 (MQ=255)                                                                                                 gtggacagcccagatgcgccttgaacgcaccagcttcggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGt                                                   >  5:284551‑M2/53‑149 (MQ=255)                                                                                                 cGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGt                                                   <  4:280293/149‑1 (MQ=255)                                                                                                       agcccagatgcgccttgaacgcaccagcttcggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGc                                             >  8:220330‑M2/47‑149 (MQ=255)                                                                                                         cccagatgcgccttgaacgcaccagcttcggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCtt                                           >  3:124135‑M2/45‑149 (MQ=255)                                                                                                         cccagatgcgccttgaacgcaccagcttcggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCtt                                           >  8:147665‑M2/45‑149 (MQ=255)                                                                                                         CCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGACGGGTGCAGGGAATGATCGTGCAACTGGTAGAACAGCTGCGTAACCGCtt                                           <  8:44248‑M1/149‑1 (MQ=255)                                                                                                          ccagatgcgccttgaacgcaccagcttcggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCttt                                          >  8:232259‑M2/44‑149 (MQ=255)                                                                                                          CCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCttt                                          <  6:266155‑M1/149‑1 (MQ=255)                                                                                                           CAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCtttt                                         <  8:166932‑M1/149‑1 (MQ=255)                                                                                                                 cTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATa                                   <  2:46979/149‑1 (MQ=255)                                                                                                                  ttGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATAc                                  >  5:129045/1‑149 (MQ=255)                                                                                                                    gCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTg                                                                        <  2:175177/109‑1 (MQ=255)                                                                                                                    gCCGAAGCTGGTGCGTTCAAGGCGCATCAGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTg                                                                        >  1:175177/1‑109 (MQ=255)                                                                                                                     ccGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGt                                                                                        >  8:286476/1‑92 (MQ=255)                                                                                                                     ccGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGt                                                                                        <  7:286476/92‑1 (MQ=255)                                                                                                                     ccGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTAACGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATAcgcg                               >  3:213670/1‑149 (MQ=255)                                                                                                                              gTGCGTTCAAGGCGCATCTGGGCTGACCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCAtgg                      >  6:273831/1‑149 (MQ=255)                                                                                                                                     cggcaagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCa                 <  4:124135‑M2/131‑1 (MQ=255)                                                                                                                                      aaGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                                                                         <  2:137490/90‑1 (MQ=255)                                                                                                                                      aaGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGt                                                                         >  1:137490/1‑90 (MQ=255)                                                                                                                                        ggCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGAt            <  3:264163/149‑1 (MQ=255)                                                                                                                                         aagcgtctgggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATa           <  7:220330‑M2/137‑1 (MQ=255)                                                                                                                                           gcATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATACg         >  4:277261/1‑149 (MQ=255)                                                                                                                                                 gggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATACGGCtgtg   >  2:33307‑M2/5‑149 (MQ=255)                                                                                                                                                  ggcTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATACGGCTGTgg  >  1:16073‑M2/4‑149 (MQ=255)                                                                                                                                                  ggcTGTCCACGGCACGCGCGGCCGGCGCGTCCTGGTCTATCGAACTGTCTGTCGGCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGACCAGCTGCGTCACCGCTTTTTCGATACGCGTTTCGATGGTGGCATCGATACGGCTGTgg  <  5:236725‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CTGCTGCGCGCAGGCCTTCGGCTTCCAGGGTGAGGCCGACCATACGCAGCAAGCGGCCTTCGACGATGGGCTGGGCCGGCAGCTCGATGGCCTCAGCGTAAGTGCCCAGACGCTTGCCGAAGCTGGTGCGTTCAAGGCGCATCTGGGCTGTCCACGGCACGCTCGGCCGGCGCGTCCAGGTCTATCGACATGTCTGGCGCCGCCGGGTGCAGGGAATGATCGTGCAACTGGTCGAACAGCTGCGTCACCGCTTTTTCGATACGCGTTTCCATGGTGGCATCGATACGGCTGTGG  >  NC_002947/4956595‑4956888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.