New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5370951	43 (0.880)	3 (0.060)	3/252	NT	6.2%	coding (986/3231 nt)	carB	carbamoyl‑phosphate synthase large subunit
	?	NC_002947	= 5370984	50 (1.060)					coding (953/3231 nt)	carB	carbamoyl‑phosphate synthase large subunit

GTCAGGCGGGCGTCGGCTTTCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAACCGCCGGTTTCCA  >  NC_002947/5370804‑5371098                                                                                                                                                    |                                                                                                                                                    gtCAGGCGGGCGTCGGCTTTCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAg                                                                                                                                                    <  2:156217/149‑1 (MQ=255) gtCAGGCGGGCGTCGGCTTTCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAg                                                                                                                                                    <  7:38306/149‑1 (MQ=255)                  tttCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTgg                                                                                                                                   <  4:42436/149‑1 (MQ=255)                  tttCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTgg                                                                                                                                   >  4:35714/1‑149 (MQ=255)                        gAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCg                                                                                                                             <  2:110190/149‑1 (MQ=255)                        gAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCg                                                                                                                             <  2:114775/149‑1 (MQ=255)                           tttCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCggg                                                                                                                           >  7:185199/1‑148 (MQ=255)                               tcGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGcc                                                                                                                      >  5:81591/1‑149 (MQ=255)                               tcGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGcc                                                                                                                      >  7:95073/1‑149 (MQ=255)                                      cGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGtggcc                                                                                                               <  7:156047‑M2/149‑6 (MQ=255)                                       gAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCt                                                                                                              >  7:267314/1‑149 (MQ=255)                                         aGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTg                                                                                                            <  6:81591/149‑1 (MQ=255)                                           cGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAccggcttcccgatcgccaagatcgccgccaagctggccattg                                                                                                           <  6:49418‑M1/148‑43 (MQ=255)                                                  gCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAgg                                                                                                   >  5:282570/1‑149 (MQ=255)                                                       gTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCgg                                                                                               <  5:248629/148‑1 (MQ=255)                                                       gTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGa                                                                                              <  8:95073/149‑1 (MQ=255)                                                        tGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGAc                                                                                             >  3:169406/1‑149 (MQ=255)                                                                     gatcgaAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACAcgc                                                                                >  3:302159/1‑149 (MQ=255)                                                                     gaacgaAGGTTCGAAGCACGCTGGGGTGCGACCTCCAGTGATGTCGTTCTGCAGCTCGTCGAGCGTGTAACCAATTGCAAGCTTGGCGGCCATCGTGGCGATCGGGAAGCCGGTGGCCTTGGCGGCCAGGGCGGACGAACTCGACAcgc                                                                                >  4:4070/4‑149 (MQ=255)                                                                       tcgaAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACAcgcgc                                                                              <  8:17390/149‑1 (MQ=255)                                                                               tCGAAGGACGCTGGGGTGCGACCGCCAGTGATGACGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCAt                                                                      >  4:43850/1‑149 (MQ=255)                                                                                 gAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGAc                                                                                             <  7:208265/124‑1 (MQ=255)                                                                                   aGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCAtctc                                                                   >  8:101828/1‑148 (MQ=255)                                                                                    ggACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGa                                                                 <  8:267314/149‑1 (MQ=255)                                                                                     gACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAccggcttcccgatcgccaagatcgccgccaagctggcca                                                                                                              >  3:229936‑M1/1‑64 (MQ=255)                                                                                     gACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAccggcttcccgatcgccaagatcgccgccaagctggcca                                                                                                              <  4:229936‑M1/103‑40 (MQ=255)                                                                                              gTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACAcgcgcg                                                                             >  2:231831/1‑127 (MQ=255)                                                                                              gTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACAcgcgcg                                                                             <  1:231831/127‑1 (MQ=255)                                                                                               tGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATg                                                      <  8:185199/149‑1 (MQ=255)                                                                                                     cGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCg                                                <  4:302159/149‑1 (MQ=255)                                                                                                     cGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCg                                                <  3:35714/149‑1 (MQ=255)                                                                                                       ccAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGa                                                                                     <  6:229400/110‑1 (MQ=255)                                                                                                       ccAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGa                                                                                     >  5:229400/1‑110 (MQ=255)                                                                                                       ccAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGgt                                              <  8:156047/149‑1 (MQ=255)                                                                                                       ccAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGgt                                              >  6:301016/1‑149 (MQ=255)                                                                                                       ccAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGgt                                              <  7:87726/149‑1 (MQ=255)                                                                                                        cAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGgtg                                             >  5:209919/1‑149 (MQ=255)                                                                                                               ggcGTTCTGCAGCGAGTCGAGGGGGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCggg                                       <  7:68604/146‑1 (MQ=255)                                                                                                               gTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCggg                                       >  4:28410/1‑148 (MQ=255)                                                                                                                       gCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCAGCCGGTGTTCGGGCAAATGcc                               >  3:150443/1‑148 (MQ=255)                                                                                                                          gCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAAc                           <  3:28410/149‑1 (MQ=255)                                                                                                                          gCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCAGTGTTCGGGCAAATGCCGAAc                           >  6:129255/1‑149 (MQ=255)                                                                                                                              gtcgAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGa                       >  8:92872/1‑149 (MQ=255)                                                                                                                              gtcgAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGa                       >  8:285897/1‑149 (MQ=255)                                                                                                                               tcgAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATGTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGAc                      >  7:266712/1‑149 (MQ=255)                                                                                                                                        tAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAAc              <  5:301016/148‑1 (MQ=255)                                                                                                                                        tAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCATTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAAcc             >  7:59911/1‑149 (MQ=255)                                                                                                                                          aCCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAAccgc           <  6:282570/149‑1 (MQ=255)                                                                                                                                          aCCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAAccg            <  7:101828/148‑1 (MQ=255)                                                                                                                                            cAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGtggccattggttacaccctcgacgagctgcagaacgacatcactggcggtcgcaccccagcgtccttcgaaccttcgatcgactacgtcgtcaccaagctgccacg          <  6:49418‑M2/148‑107 (MQ=255)                                                                                                                                               tGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGtggccattggttacaccctcgacgagctgcagaacgacatcactggcggtcgcaccccagcgtc                                                    <  4:229936‑M2/103‑65 (MQ=255)                                                                                                                                               tGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGtggccattggttacaccctcgacgagctgcagaacgacatcactggcggtcgcaccccagcgtc                                                    >  3:229936‑M2/1‑39 (MQ=255)                                                                                                                                                ggCCAccggcttcccgatcgccaagatcgccgccaagctggccattggttacaccctcgacgagctgcagaacgacatcactggcggtcgcaccccagcgtccttcgaaccttcgatcgactacgtcgtcaccaagctgccacgcttcg     <  7:156047‑M1/149‑145 (MQ=255)                                                                                                                                                 gCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAACCGCCGGTTTc    <  4:169406/149‑1 (MQ=255)                                                                                                                                                   cAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAACCGCCGGTTTCca  >  3:179578/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GTCAGGCGGGCGTCGGCTTTCGGGAATTTCTCGAAGGCGAAGCGTGGCAGCTTGGTGACGACGTAGTCGATCGAAGGTTCGAAGGACGCTGGGGTGCGACCGCCAGTGATGTCGTTCTGCAGCTCGTCGAGGGTGTAACCAATGGCCAGCTTGGCGGCGATCTTGGCGATCGGGAAGCCGGTGGCCTTGGAGGCCAGGGCGGACGAACGCGACACGCGCGGGTTCATCTCGATGACAACCATGCGGCCGGTGTTCGGGCAAATGCCGAACTGGACGTTGGAACCGCCGGTTTCCA  >  NC_002947/5370804‑5371098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.