New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5817241	58 (1.190)	5 (0.110)	5/250	NT	8.9%	coding (713/1011 nt)	pilT	twitching motility protein
	?	NC_002947	= 5817265	47 (1.010)					coding (689/1011 nt)	pilT	twitching motility protein

CCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTGCGCAGCCCCTGAGCAA  >  NC_002947/5817102‑5817388                                                                                                                                            |                                                                                                                                                    ccGCGCCGCCACCCTCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAAc                                                                                                                                            <  3:106316/149‑1 (MQ=255)  cgcgCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCACCCTGTCGATGCTGCTGGTCGCCGAAcg                                                                                                                                           >  4:150859/1‑149 (MQ=255)             ccGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACgg                                                                                                                                >  2:35254/1‑149 (MQ=255)                cccACCCCCTACGCGCCTGACCAGCAACTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAAAGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTAGCCGAACGCGCATGCACGGTTg                                                                                                                             >  7:46683/1‑149 (MQ=255)                  cACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGcaaccgtgcatgcgcgttcggcgac                                                                                                                            >  6:36525‑M1/1‑123 (MQ=255)                  cACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGcaaccgtgcatgcgcgttcggcgac                                                                                                                            <  5:36525‑M1/148‑26 (MQ=255)                  cACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGtt                                                                                                                              <  6:59838/146‑1 (MQ=255)                  cACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGtt                                                                                                                              >  5:59838/1‑146 (MQ=255)                      gcctACGCGCCTGCCCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGcaaccgtgcatgcgcgttcggcgaccagca                                                                                                                       <  5:198159‑M1/148‑31 (MQ=255)                      cccTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGccagca                                                                                                                       <  3:196595‑M2/149‑7 (MQ=255)                       ccTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCAc                                                                                                                      >  7:201795/1‑149 (MQ=255)                        cTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCAc                                                                                                                      >  2:17055/1‑148 (MQ=255)                        cTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCAGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCAcc                                                                                                                     <  3:215277/149‑1 (MQ=255)                          aCGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAg                                                                                                                   >  2:19741/1‑149 (MQ=255)                           cgcgCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAg                                                                                                                   <  1:35254/148‑1 (MQ=255)                               ccTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAAc                                                                                                                                            >  4:1530/1‑119 (MQ=255)                               ccTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAAc                                                                                                                                            <  3:1530/119‑1 (MQ=255)                                cTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGccc                                                                                                             <  8:201795/149‑1 (MQ=255)                                  gACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCgg                                                                                                           >  8:152679/1‑149 (MQ=255)                                           cTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCcg                                                                                                  >  4:231102/1‑149 (MQ=255)                                               gcgACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGcaaccgtgcatgcgcgttcggcgaccagcagc                                                                                                                     <  2:271474‑M1/126‑33 (MQ=255)                                               gcgACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGcaaccgtgcatgcgcgttcggcgaccagcagc                                                                                                                     >  1:271474‑M1/1‑94 (MQ=255)                                               gcgACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCcgcgcg                                                                                              >  2:303047/1‑149 (MQ=255)                                                   ccaccaGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAgg                                                                                          <  3:150859/149‑1 (MQ=255)                                                         ggCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAgg                                                                                    <  4:50595/149‑1 (MQ=255)                                                          gcgcAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGc                                                                                   >  7:214696/1‑149 (MQ=255)                                                              aGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAAt                                                                               <  1:19741/149‑1 (MQ=255)                                                              aGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAAt                                                                               <  4:196595/149‑1 (MQ=255)                                                               gCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGTCAGCACCAGGTGCCCGGTTTCGGCTGCGCGCAGGGCCAGGCGAATg                                                                              <  8:46683/149‑1 (MQ=255)                                                                 gACTCCGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGt                                                                            <  1:303047/149‑1 (MQ=255)                                                                    tCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTc                                                                         >  8:179432/1‑149 (MQ=255)                                                                      ggCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCa                                                                       <  8:214696/149‑1 (MQ=255)                                                                      ggCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCa                                                                       <  1:17055/149‑1 (MQ=255)                                                                      ggCCAGCATCGCCCGCACCAACGGCATATCCTCGGCAGCACACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGCTTCCCAGCCCCCGGTGCCCGGTTTCGGCCCCGCGCAGGGCCAGGCGAATGCTTTc                                                                         >  7:279370/1‑147 (MQ=255)                                                                        ccAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAgg                                                                     <  6:235821/149‑1 (MQ=255)                                                                             aTCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTcgcg                                                                <  7:179432/149‑1 (MQ=255)                                                                                  ccGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAAc                                                            >  3:275050/1‑148 (MQ=255)                                                                                      aCCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAAc                                                            <  5:110064/144‑1 (MQ=255)                                                                                      aCCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAAc                                                            >  6:110064/1‑144 (MQ=255)                                                                                        cAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGa                                                     >  3:34690/1‑149 (MQ=255)                                                                                         aaCGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGtt                                                                           <  4:246362/126‑1 (MQ=255)                                                                                         aaCGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGtt                                                                           >  3:246362/1‑126 (MQ=255)                                                                                         aaCGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGAt                                                    >  6:312219/1‑149 (MQ=255)                                                                                             gCTTTTGCTGGGCAGGAAACTGCTCCACCCTCCTGTCGCTGCTGCTGGGCGCTGTACGCGCATGCACGGCTGCCAGCACCAGGTGCCCGGTTTCGGGCGGGCGCAGGGGCAGGGGAATGGTTTCCTGGTCGCGCAACTCGCCGatgatg                                                <  8:279370/149‑1 (MQ=255)                                                                                              cTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGa                                               <  3:30203/149‑1 (MQ=255)                                                                                                     tCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTc                                        >  3:80455/1‑149 (MQ=255)                                                                                                         cagcaAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCgg                                                                                                     <  4:54700/84‑1 (MQ=255)                                                                                                         cagcaAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCgg                                                                                                     >  3:54700/1‑84 (MQ=255)                                                                                                                 acCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCg                                      >  6:19290/1‑139 (MQ=255)                                                                                                                 acCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCg                                      <  5:19290/139‑1 (MQ=255)                                                                                                                   cTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACt                                                           <  8:67708/116‑1 (MQ=255)                                                                                                                   cTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACt                                                           >  7:67708/1‑116 (MQ=255)                                                                                                                      caccaACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGgcgcagcg                       <  3:231102/149‑1 (MQ=255)                                                                                                                       accaACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGa                                               <  7:74891/124‑1 (MQ=255)                                                                                                                       accaACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGa                                               >  8:74891/1‑124 (MQ=255)                                                                                                                         caACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCAc                    >  7:53435/1‑149 (MQ=255)                                                                                                                         caACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCAc                    >  2:50652/1‑149 (MQ=255)                                                                                                                             cTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTgcg                <  7:152679/149‑1 (MQ=255)                                                                                                                               gTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGc                                                                                                    <  6:134321/63‑1 (MQ=255)                                                                                                                               gTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGc                                                                                                    >  5:134321/1‑63 (MQ=255)                                                                                                                                tCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTgcgc               <  4:80455/147‑1 (MQ=255)                                                                                                                                  gATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTGCGCAGcc           >  3:212422/1‑149 (MQ=255)                                                                                                                                  gATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTGCGCAGcc           >  8:285552/1‑149 (MQ=255)                                                                                                                                     gctgctGGTCGCCGAACGCGCATGCACGGTTGccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgc                               <  2:271474‑M2/126‑95 (MQ=255)                                                                                                                                     gctgctGGTCGCCGAACGCGCATGCACGGTTGccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgc                               >  1:271474‑M2/1‑32 (MQ=255)                                                                                                                                       tgctgGcaaccgtgcatgcgcgttcggcgaccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgcgcaggtgctggtcaggcgcgtaggg      <  3:196595‑M1/149‑144 (MQ=255)                                                                                                                                       tgctgGTCGCCGAACGCGCATGCACGGTTGccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgcgcaggtgctgggcaggcgcgtaggc      <  5:198159‑M2/149‑120 (MQ=255)                                                                                                                                       tgctgGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTGCGCAGCCCCTGa      <  4:34690/149‑1 (MQ=255)                                                                                                                                            gTCGCCGAACGCGCATGCACGGTTGccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgcgcaggtgctggtcaggcgcgtagggggtg  >  6:36525‑M2/1‑25 (MQ=255)                                                                                                                                            gTCGCCGAACGCGCATGCACGGTTGccagcagcatcgacaggttggtggaggtgtttgctgccgaggaaaagccgttggtgcgggcgatgctggccgagtcgctgcgcctggtggtcgcgcaggtgctggtcaggcgcgtagggggtg  <  5:36525‑M2/148‑124 (MQ=255)                                                                                                                                            |                                                                                                                                                    CCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCCACCAACCTGTCGATGCTGCTGGTCGCCGAACGCGCATGCACGGTTGCCAGCACCAGGTGCCCGGTTTCGGCCGCGCGCAGGGCCAGGCGAATGGTTTCCAGGTCGCGCAACTCGCCGATCATGATCACGTCCGGGTCCTGGCGCAGCGCACTGCGCAGCCCCTGAGCAA  >  NC_002947/5817102‑5817388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.