New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874548 =	45 (0.920)	5 (0.110)	5/240	NT	9.5%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874630 =	54 (1.210)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase

TGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874405‑5874694                                                                                                                                                |                                                                                                                                                      gcggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTcgc                                                                                                                                                   >  1:205489‑M1/144‑148 (MQ=255)  cggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCgg                                                                                                                                                 >  7:287123‑M1/143‑149 (MQ=255)   ggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCggg                                                                                                                                                <  4:269488‑M1/8‑1 (MQ=255)      gctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCtt                                                                                                                                             >  4:89422‑M1/139‑149 (MQ=255)        gAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑c                                                                                                                                          <  2:290739/149‑1 (MQ=255)                  ggTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGc                                                                                                                                <  5:250696/149‑1 (MQ=255)                      cAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAg                                                                                                                            <  3:48646/149‑1 (MQ=255)                        gATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGt                                                                                                                          <  1:155125/149‑1 (MQ=255)                                 gCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CACGCTCCTGCCAAGGTATCT‑CAGGc                                                                                                                >  8:221838/1‑149 (MQ=255)                                 cctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGc                                                                                                                <  3:163086‑M1/38‑1 (MQ=255)                                   ccAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCt                                                                                                              >  7:55535/1‑149 (MQ=255)                                    cAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCCGCTCCTGCCAAGGTATCT‑CAGGc                                                                                                                <  1:3144/147‑1 (MQ=255)                                    cAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTcc                                                                                                                                   <  1:93750/128‑1 (MQ=255)                                    cAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTcc                                                                                                                                   >  2:93750/1‑128 (MQ=255)                                    cAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGc                                                                                                                >  2:3144/1‑146 (MQ=255)                                      gggCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTAt                                                                                                                        >  4:32093/1‑137 (MQ=255)                                      gggCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTAt                                                                                                                        <  3:32093/137‑1 (MQ=255)                                                  aCAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAg                                                                                               >  6:32995/1‑148 (MQ=255)                                                      cagcGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCt                                                                                          >  5:298486/1‑149 (MQ=255)                                                      caagatcggttacccgtactgggacgagaccgaaaacacggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCt                                                                                          <  3:169827‑M1/59‑1 (MQ=255)                                                         cgcgGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCtgtg                                                                                       <  5:32995/149‑1 (MQ=255)                                                            ggTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTgg                                                                                      >  7:19361/1‑147 (MQ=255)                                                                gCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCgg                                                                                >  3:298755/1‑149 (MQ=255)                                                                 cGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCggg                                                                               >  3:54314/1‑149 (MQ=255)                                                                  gatgatGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCTCCAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCggg                                                                               <  1:205422/149‑1 (MQ=255)                                                                  gatgatGTGAAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTAGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCATGCCAAGGTATAT‑CAGGCCT‑TCAGGCCTGCGCAGAACCTGTGGGAGCggg                                                                               >  2:198663/1‑148 (MQ=255)                                                                    tgatgTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCaa                                                                            <  8:19361/149‑1 (MQ=255)                                                                        ccttgacgagacccaaaacccggactagaaactgctcctgcgcggagcggctaatctagggctgatggccctTTCTCTGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGccc                                                                        >  8:268843‑M1/73‑149 (MQ=255)                                                                          gCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCCGGCTTA‑ACACCAACAGCCAAGGTATCT‑CAGGCCT‑TGAGGACAGCGCAGTACCTGTGGGAACCGGCAAGCCcgc                                                                      >  3:162969/1‑149 (MQ=255)                                                                            aGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGTAGCGGGCAAGCCcgcg                                                                     >  8:140298/1‑148 (MQ=255)                                                                              ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CACGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGaaa                                                                  <  7:221838/149‑1 (MQ=255)                                                                                agaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAgg                                                                >  4:163086‑M1/65‑149 (MQ=255)                                                                                  ttGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGc                                                              >  5:76033/1‑149 (MQ=255)                                                                                    gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCTCTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAggg                                                               <  1:67622/147‑1 (MQ=255)                                                                                    gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGc                                                              <  5:122468/147‑1 (MQ=255)                                                                                    gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGc                                                              <  1:297581/147‑1 (MQ=255)                                                                                       cGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                           >  4:78897/1‑147 (MQ=255)                                                                                              gccttcaaagtgttcctgggctgagcggctatggtagggcttatggccctTTCGCGGGCTTA‑CCCGCTCCTGCAAATTTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAg                                                  >  4:169827‑M1/51‑149 (MQ=255)                                                                                                   ttCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAATCCCGCGAAAGGGCCATCAGCCCTAGCTTAg                                             >  7:66167/1‑149 (MQ=255)                                                                                                       aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGc                                                       <  7:62153/135‑1 (MQ=255)                                                                                                       aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGc                                                       >  8:62153/1‑135 (MQ=255)                                                                                                         ctctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCt                                        >  8:179283/1‑148 (MQ=255)                                                                                                           ctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                     >  1:174219/1‑149 (MQ=255)                                                                                                            tcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCa                                      <  8:55535/147‑1 (MQ=255)                                                                                                               gtcgtcCTTAAACTGGCATTTTGCTTTAGATTCTTCGCTGTCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGTCCT‑TTAGGTCTGCGCAGTACCTGTGGGAGAGGGCAAGCGCGCGAAAGGGCGATCAGCCCTAGCTTAGCCGCTCATCCCa                                 <  8:66167/149‑1 (MQ=255)                                                                                                                      ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  5:272640/1‑149 (MQ=255)                                                                                                                      ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  1:51220/1‑149 (MQ=255)                                                                                                                      ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  3:217783/1‑149 (MQ=255)                                                                                                                      ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCATA‑CACGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTCCGCAGAACCTGTCGGAGCGGGCAACCCAGCGAAAGGGCCATCAGCCCTAGCATAGCCGCTCAGCCCAgcca                             >  8:151737/1‑143 (MQ=255)                                                                                                                        aaaCTGGCATTTTGGGGTAGCTTCTTCGCGGTCTTA‑CCCGCTCCTGCCATGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCTAAAGGGCCATGAGCCCTAGCTTAGCCGCTCAGCCCAGGAACa                           <  7:151737/146‑1 (MQ=39)                                                                                                                              gCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTa                    <  1:306299/147‑1 (MQ=255)                                                                                                                                    tGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGTCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCggg             <  4:217783/148‑1 (MQ=255)                                                                                                                                     gCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGt            <  6:298486/148‑1 (MQ=255)                                                                                                                                        gTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTc        >  3:257890/1‑149 (MQ=255)                                                                                                                                            cttcttCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtc    <  6:76033/149‑1 (MQ=255)                                                                                                                                             ttcttcGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                           <  8:213292/93‑1 (MQ=255)                                                                                                                                             ttcttcGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                           >  7:213292/1‑93 (MQ=255)                                                                                                                                             ttcttcGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCCGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtct   >  8:6533/1‑149 (MQ=255)                                                                                                                                               cttcGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtctc  <  7:179283/148‑1 (MQ=255)                                                                                                                                               cttcGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtct   <  4:298755/147‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                      TGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTA‑CCCGCTCCTGCCAAGGTATCT‑CAGGCCT‑TGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874405‑5874694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.