New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5903760 =	45 (0.920)	5 (0.110)	3/242	NT	11.0%	intergenic (+16/+91)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903842 =	39 (0.860)					intergenic (+98/+9)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease

TTACCAGGACCATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCT  >  NC_002947/5903612‑5903908                                                                                                                                                     |                                                                                                                                                     ttACCAGGACCATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCT                                                                                                                                                      >  2:111888‑M1/1‑149 (MQ=255) cttcttcgtctggtacttcagccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctt                                                                                                                                                      <  5:305068‑M1/1‑1 (MQ=255)    ccAGGACCATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCG                                                                                                                                                   >  4:95043‑M1/1‑149 (MQ=255)     cAGGACCATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGC                                                                                                                                                  >  3:295773‑M1/1‑149 (MQ=255)                    cGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGcga                                                                                                                                    <  1:267471/148‑3 (MQ=255)                    cGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTc                                                                                                                                    <  1:306521/148‑1 (MQ=255)                     ggCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAcgcccgctcc                                                                                                                                   >  4:183362‑M1/1‑138 (MQ=255)                      ccgccaggccgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctTTCGCGGGCGTgcccgcgaaag                                                                                                                                 >  7:34671‑M1/128‑144 (MQ=255)                             gagTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCt                                                                                                                          <  7:28923/149‑1 (MQ=255)                               cgaagagcgtcgtcgcaaggcgattcagcaggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctTTCGCGGGCACGCCCGCTCCCACAGGGCTca                                                                                                                        >  2:35346‑M1/119‑149 (MQ=255)                                      gTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACaa                                                                                                                  <  1:111888/148‑1 (MQ=255)                                           tGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCTCGGGCATGCCCGCTCCCACAGGGCTCACCACAccccag                                                                                                             >  8:257948/1‑146 (MQ=255)                                           tGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTg                                                                                                             >  8:12517/1‑148 (MQ=255)                                             tAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGaa                                                                                                           <  7:145321/148‑1 (MQ=255)                                              aGCCCGTTACATTGTTGCCAATCCCTTGAGGGCTGTATTGGTCAGAAGTATCAGGTACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTc                                                                                                                         <  5:50297/133‑1 (MQ=255)                                              aGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATAAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGATGGAGCCTTCGAGGGCATGCCCGCTCCCACAGGGATc                                                                                                                         >  6:50297/1‑133 (MQ=255)                                                cccGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAATCCCGCACCCACAGGGCTCACCACAACCCTCAATGCt                                                                                                       >  7:107328/1‑149 (MQ=255)                                                  cGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAtgcccgctcccacagggacctcacagccttcagggttgtg                                                                                                     <  2:173428‑M1/149‑41 (MQ=255)                                                   ggTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCACCCACAGGGCTCACCAACACCCAGAAGGCggtt                                                                                                    >  4:174390/1‑148 (MQ=255)                                                    gTACATTGTTGCAAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGa                                                                                                   <  7:257948/149‑1 (MQ=255)                                                      aCATTGTTGCCAAACCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAg                                                                                                  <  8:266861/148‑1 (MQ=255)                                                         ttgttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCGACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgtg                                                                                                    <  6:248431/143‑1 (MQ=255)                                                         ttgttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAcgcccgctcccacagggacctcacagccttcagggttgtggtgagcc                                                                                              <  3:183362‑M1/149‑48 (MQ=255)                                                         ttgttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCtgtg                                                                                                    >  5:248431/1‑143 (MQ=255)                                                         ttgttgCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTcc                                                                                              >  8:279490/1‑149 (MQ=255)                                                             ggcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgt                                                                                          >  1:143241‑M1/89‑149 (MQ=255)                                                              gcgatcgaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgtg                                                                                         >  3:266576‑M1/88‑149 (MQ=255)                                                              gCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAtgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtg                                                                                         >  7:184457‑M1/1‑97 (MQ=255)                                                              gCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAcgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtg                                                                                         >  2:164710‑M1/1‑97 (MQ=255)                                                              gCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgt                                                                                          <  3:95043/148‑1 (MQ=255)                                                              gCCAATCCCTGGAGGGCTGGTTTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTCTGAATCGGTGCTGGCGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgt                                                                                          <  4:232922/148‑1 (MQ=255)                                                               ccAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAcgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtgg                                                                                        <  1:164710‑M1/149‑54 (MQ=255)                                                               ccAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTcc                                                                                              >  1:72571/1‑143 (MQ=255)                                                               ccAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTcc                                                                                              <  2:72571/143‑1 (MQ=255)                                                               ccAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTgg                                                                                        <  7:59564/149‑1 (MQ=255)                                                                cAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTgg                                                                                        >  5:98766/1‑148 (MQ=255)                                                                 aaTCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgt                                                                                          >  6:245339/1‑145 (MQ=255)                                                                 aaTCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCtgt                                                                                          <  5:245339/145‑1 (MQ=255)                                                                    gaagagggtgctgcagccaacgcttcgcagccgcaggtcaagcgcccggcgcaggtggctgcgtcggcctgacctggccctTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCg                                                                                   >  8:263192‑M1/82‑149 (MQ=255)                                                                     ccTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCAtgcccgctcccacagggacctcacagccttcagggttgtggtgagccctgtgggagcgg                                                                                  <  8:184457‑M1/149‑60 (MQ=255)                                                                            ggCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcc                                                                           <  6:82147‑M2/149‑5 (MQ=255)                                                                              cTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCCCCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGtgcccg                                                                         <  8:140588‑M2/149‑7 (MQ=255)                                                                                   ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                    <  7:12517/149‑1 (MQ=255)                                                                                   ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                    <  2:224478/149‑1 (MQ=255)                                                                                      gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAgg                                                                                                         >  3:110040/1‑109 (MQ=255)                                                                                      gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAgg                                                                                                         <  4:110040/109‑1 (MQ=255)                                                                                      gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                  >  1:210733/1‑148 (MQ=255)                                                                                      gTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAgg                                                                  <  2:210733/148‑1 (MQ=255)                                                                                      gTCAGAAGTATCAGGGACTATCCACATGGGGATGGGGTATGGCTTTTATGCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACCGGGCTCACCACACCCCTTATGGCTGTGAGGTCCCTGTGGGAGCGGGCGGGCCCGCGAAAgg                                                                  <  4:295773/148‑1 (MQ=38)                                                                                       tCATAAGTATCAGGGACTATCCAAATTGGGATGCTGTATGGCTTTGAATGGGTGCTGGAGCCTTCGCGGGAATGCCAGCTCAAACAGTGCTCACCACAACCCTGAAGTCTGTGAGGTCCCtgt                                                                                          <  4:183963/123‑1 (MQ=255)                                                                                       tCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGATGGAGCCTTCGCGGGCATGCCCGCTCCAACAGGGCTCACCACAACCCTGAAGCCTGTGAGGTACCtgt                                                                                          >  3:183963/1‑123 (MQ=255)                                                                                                tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCGCCCACCGGGCTCACCACCACCCTGAAGGCGGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGGCAgg                                                       >  2:76296/1‑149 (MQ=39)                                                                                                tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCCCGGGCATGCCCGCTCCCCCAGGGCTCACCCCAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                       >  2:30334/1‑149 (MQ=255)                                                                                                    ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCCATCCCCCACCCCCACGGCTGACCACCACCCAGAACGGGGGGAGGTGCCTGTGGGGGCCGGCGTGCCCGCGCAAAGGCCCCGTGCGGCCGa                                                   >  2:271622/1‑149 (MQ=255)                                                                                                    ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGa                                                   >  2:210367/1‑149 (MQ=255)                                                                                                       cTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCGGTGGGAGCGGGCGTGCCCGCCCAAGGGCCACGTCAGGCCGACGc                                                >  6:66480/1‑149 (MQ=255)                                                                                                         aTCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTAGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCACCGAAAGGGCCAGGTCAGGCCGACGCAg                                              >  5:168535/1‑149 (MQ=255)                                                                                                          tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTTTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGc                                             >  1:36311/1‑149 (MQ=255)                                                                                                               aTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCt                                        <  3:41828/149‑1 (MQ=255)                                                                                                                   ggttggggtttgggtttgAATCGGTGCTGGAGCTTTAGCGGTCTTGCCCGCTCCCACAGGGGTCACCACAACCTTGATGGCTGTGTGGTCGCTGTGGTTGGGGGGGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTgcgc                                    <  6:168535/143‑1 (MQ=255)                                                                                                                             tGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTg                          <  7:232466/149‑1 (MQ=255)                                                                                                                               gCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGa                         <  5:66480/148‑1 (MQ=255)                                                                                                                                 tttGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCt                      >  6:305068/1‑149 (MQ=255)                                                                                                                                                 aGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt      <  1:30334/149‑1 (MQ=255)                                                                                                                                                   ccTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg    <  1:271622/149‑1 (MQ=255)                                                                                                                                                     TTCGCGGGCATGCCCGCTCCCACAGGGCTCCCCACAACCCTGAAGGCTGTGAGGTCCCTGGGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGCCGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCt  <  5:22637‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TTACCAGGACCATGCGCTGCGGCAGGAAGAGTGTGTGGTTCATGTAGCCCGGTACATTGTTGCCAATCCCTTGAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCCTGAAGGCTGTGAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCT  >  NC_002947/5903612‑5903908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.