New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1167535	43 (0.880)	3 (0.070)	3/246	NT	6.6%	coding (479/729 nt)	pgl	6‑phosphogluconolactonase
	?	NC_002947	= 1167560	44 (0.960)					coding (504/729 nt)	pgl	6‑phosphogluconolactonase

GGCGGAGAACCTTGATGCAGCTGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTACCCTGCGCGCCGCGC  >  NC_002947/1167413‑1167708                                                                                                                                                    |                                                                                                                                                     ggCGGAGAACCTTGATGCAGCTGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACc                                                                                                                                                     <  5:26396‑M2/149‑2 (MQ=255)  gCGGAGAACCTTGATGCAGCTGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACct                                                                                                                                                    >  4:117155‑M2/1‑147 (MQ=255)         aCCTTGATGCAGCTGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGc                                                                                                                                             <  8:293317/149‑1 (MQ=255)           cTTGATGCAGCTGCGCTCAAAGATGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGcc                                                                                                                                            >  6:125709/1‑148 (MQ=255)                      tGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGctgcc                                                                                                                                >  2:38944/1‑149 (MQ=255)                         gcTCAAAGCTGACCGGGCGTTGGCCGGGGTACCGCCGAGCGCCGTGCTGGTGCTGGGCATGGGCGCCGATGGCCATCCCGCATCGATGTTCCCCGCCAGTCCCACCCTGGACGAAGGCCTGGACCTGGCGGCCCCACGCCGctgcgtgc                                                                                                                             >  2:226804/1‑149 (MQ=255)                         gcTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGctgcctgc                                                                                                                             <  1:147322/149‑1 (MQ=255)                         gcTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGctgcctgc                                                                                                                             >  2:128066/1‑149 (MQ=255)                         gcTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGctgcctgc                                                                                                                             <  3:201108/149‑1 (MQ=255)                             aaaGCTGACCTGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGAt                                                                                                                         >  4:66612/1‑149 (MQ=255)                              aaGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATg                                                                                                                        <  4:1456/149‑1 (MQ=255)                                           cTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGc                                                                                                            <  4:31373/148‑1 (MQ=255)                                           cTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGc                                                                                                            >  3:31373/1‑148 (MQ=255)                                           cTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCg                                                                                                           >  8:153918/1‑149 (MQ=255)                                                 cGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACctggcgg                                                                                                                                               >  4:282063‑M2/1‑100 (MQ=255)                                                 cGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACctggcgg                                                                                                                                               <  3:282063‑M2/107‑8 (MQ=255)                                                 cGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCg                                                                                                      >  7:151209/1‑148 (MQ=255)                                                        ccgccgATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAgcg                                                                                              >  5:35130/1‑149 (MQ=255)                                                         cgccgATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAgcgc                                                                                             <  6:26396/149‑1 (MQ=255)                                                          gccgATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGcc                                                                                            >  5:195773/1‑149 (MQ=255)                                                             gATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGt                                                                                         >  3:203641/1‑149 (MQ=255)                                                                 gACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGa                                                                                      <  3:66612/148‑1 (MQ=255)                                                                   cGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCTCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGa                                                                                   <  5:125709/149‑1 (MQ=255)                                                                   cGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTTCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGa                                                                                   <  1:226804/149‑1 (MQ=255)                                                                   cGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGa                                                                                   <  1:222817/149‑1 (MQ=255)                                                                      gctggtgctggGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGAccc                                                                                >  8:2312/1‑149 (MQ=255)                                                                         ggtgctggGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAgcgc                                                                                             <  5:219024/133‑1 (MQ=255)                                                                         ggtgctggGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAgcgc                                                                                             >  6:219024/1‑133 (MQ=255)                                                                            gctggGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCgc                                                                          >  2:88477/1‑149 (MQ=255)                                                                                gtgctgtgCGACGATGGCCATCCCGCCGGGCTGGTCCCCGCCAGTCCCAACCTTGCAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCgctgct                                                                      <  4:212840/142‑1 (MQ=255)                                                                                 gCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGctgctg                                                                     <  6:35130/149‑1 (MQ=255)                                                                                       gCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAgc                                                               >  3:211457/1‑149 (MQ=255)                                                                                               ggCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCtt                                                       >  5:104937/1‑149 (MQ=255)                                                                                                gCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTc                                                      <  6:195773/149‑1 (MQ=255)                                                                                                  cATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCAt                                                    >  4:123622/1‑149 (MQ=255)                                                                                                   aTACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATc                                                   <  6:104937/149‑1 (MQ=255)                                                                                                    tACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATcg                                                  <  8:151209/149‑1 (MQ=255)                                                                                                       cGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGa                                                                                      <  6:66699/110‑1 (MQ=255)                                                                                                       cGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGa                                                                                      >  5:66699/1‑110 (MQ=255)                                                                                                            cGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGctgtct                                          >  2:154/1‑149 (MQ=255)                                                                                                             gCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGctgtc                                           <  7:2312/147‑1 (MQ=255)                                                                                                                   ccccGCCAGTCCCAACCTGGAAGCAGGCCTGGACctggcggggaacagcgaggcggtatggccatcgtcgcccatgcccagcaccagcacgtcgatcggcggtagctcggccaaggcctggtcagctttgagcgcagctgcatcaaggt                                   <  3:242758‑M2/149‑116 (MQ=255)                                                                                                                    cccGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAg                                   <  1:294303/148‑1 (MQ=255)                                                                                                                    cccGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAg                                   <  7:153918/148‑1 (MQ=255)                                                                                                                       cacAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCCGGCCCACGACGGAGCCAGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTGCGCTGCTGGCCCGCGCGGCCTTCATCCCGCTGTCTGTGAAAGGc                                 >  3:181990/3‑147 (MQ=255)                                                                                                                        ccAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAg                              >  2:8461/1‑149 (MQ=255)                                                                                                                         cAGTCCCAACCTGGAAGCAGGCCTGGACctggcggggaacagcgaggcggtatggccatcgtcgcccatgcccagcaccagcacgtcgatcggcggtagctcggccaaggcctggtcag                                                           >  1:170525‑M2/1‑28 (MQ=255)                                                                                                                         cAGTCCCAACCTGGAAGCAGGCCTGGACctggcggggaacagcgaggcggtatggccatcgtcgcccatgcccagcaccagcacgtcgatcggcggtagctcggccaaggcctggtcag                                                           <  2:170525‑M2/119‑92 (MQ=255)                                                                                                                         cAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAgg                             <  4:154759/149‑1 (MQ=255)                                                                                                                                  ccTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAgg                             >  1:292927/1‑140 (MQ=255)                                                                                                                                  ccTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAgg                             <  2:292927/140‑1 (MQ=255)                                                                                                                                     ggAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCCATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTa                 >  2:259174/1‑149 (MQ=255)                                                                                                                                         gCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTACCCt             >  8:249731/1‑149 (MQ=255)                                                                                                                                                  gACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTACCCTGcgcgccgc    >  3:273694/1‑149 (MQ=255)                                                                                                                                                    ccTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTACCCTGcgcgccgcgc  >  2:255554/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGCGGAGAACCTTGATGCAGCTGCGCTCAAAGCTGACCAGGCCTTGGCCGAGCTACCGCCGATCGACGTGCTGGTGCTGGGCATGGGCGACGATGGCCATACCGCCTCGCTGTTCCCCGCCAGTCCCAACCTGGAAGCAGGCCTGGACCTGGCGGGCCCACGCCGCTGCCTGCCGATGCTGGCGCCGAGCGTGCCGCACCAGCGCCTGTCGATGACCCGTTCGCTGCTGGCCAGCGCGGCCTTCATCGCGCTGTCTGTGCAAGGCCAGGGCAAACTCGCTACCCTGCGCGCCGCGC  >  NC_002947/1167413‑1167708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.