New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1964521 = | 44 (0.900) | 4 (0.090) | 4/244 | NT | 8.6% | coding (733/2526 nt) | yegE | phosphodiesterase domain‑containing diguanylate cyclase |
? | NC_002947 | 1964562 = | 44 (0.970) | coding (774/2526 nt) | yegE | phosphodiesterase domain‑containing diguanylate cyclase |
CCCGGCGGCCAAGGCCTTCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGC > NC_002947/1964415‑1964706 | cccGGCGGCCAAGGCCTTCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCt > 2:48224/1‑149 (MQ=255) cggcggCCAAGGCCTTCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCttt < 8:277164/149‑1 (MQ=255) ggcCAAGGCCTTCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCa < 2:31654/149‑1 (MQ=255) ttCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTg > 6:79885/1‑147 (MQ=255) tCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAg > 6:295854/1‑149 (MQ=255) ttGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGaaaaa > 8:177876/1‑147 (MQ=255) gggTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAaga < 5:295854/147‑1 (MQ=255) aaGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTgcg > 6:190970/1‑149 (MQ=255) aGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTgcgc < 1:122620/149‑1 (MQ=255) tCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGAt > 1:129154/1‑149 (MQ=255) gctgcGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAgg > 7:258209/1‑149 (MQ=255) gctgcGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAg < 8:23984/148‑1 (MQ=255) gctgcGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAg < 3:285045/148‑1 (MQ=255) cGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCAt > 4:147466/1‑149 (MQ=255) gctgATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATg > 8:96511/1‑149 (MQ=255) ctgATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGc > 7:53461/1‑149 (MQ=255) gATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGGGCAGATTACCCTGCAGGCCATCGGGGATGCgg > 4:78284/1‑149 (MQ=255) aTCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCgg < 1:48224/148‑1 (MQ=255) aTCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCgg < 7:177876/148‑1 (MQ=255) tCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGt > 2:151471/1‑148 (MQ=255) aCCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGGGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGAt < 3:78284/149‑1 (MQ=255) aCCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGAt > 5:52663/1‑149 (MQ=255) ccAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGAtt < 8:258209/149‑1 (MQ=255) ccAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGAt > 5:101351/1‑148 (MQ=255) ctgctgACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAAc < 5:190970/149‑1 (MQ=255) cAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAg > 6:223830/1‑149 (MQ=255) aaTGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAgg < 8:53461/149‑1 (MQ=255) tCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACaa < 2:73887/132‑1 (MQ=255) tCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACaa > 1:73887/1‑132 (MQ=255) cTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAatat > 7:22201/1‑149 (MQ=255) cTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAata < 5:79885/148‑1 (MQ=255) tGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATc > 1:162305/1‑149 (MQ=255) aTCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCg < 6:52663/148‑1 (MQ=255) aTCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAAAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCgg < 5:162882/149‑1 (MQ=255) ccATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTAc < 8:22201/149‑1 (MQ=255) cATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACa > 7:227245/1‑149 (MQ=255) gcctggcgctgggccaacagcttgctggagcggcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACaa < 1:134062‑M2/77‑1 (MQ=255) gcctggcgctgggccaacagcttgctggagcggcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACaa > 2:134062‑M2/42‑118 (MQ=255) ctggcgctgggccaacagcttgctggagcggcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAAcc > 2:41727‑M2/40‑149 (MQ=255) TGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAAccc < 7:72473‑M1/149‑1 (MQ=255) GCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCgg < 3:180622‑M1/149‑1 (MQ=255) GCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGcc < 6:125931‑M1/149‑1 (MQ=255) cAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGa < 4:120292/147‑1 (MQ=255) cAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGc < 5:223830/149‑1 (MQ=255) aGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCa < 2:129154/149‑1 (MQ=255) cAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGt > 1:83290/1‑149 (MQ=255) agcttgctggagcggcgccaggcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACGCTGCAGGCCATCGGGGATGCGGTGATTACAAGGGATGTCGATGGCTATATCGGCTACATGAACCCGGCCGCCGAGCAGtt < 1:41727‑M2/126‑1 (MQ=255) aaGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGtt < 1:151471/149‑1 (MQ=255) gCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGa < 5:125931/149‑1 (MQ=255) gCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGa < 8:72473/149‑1 (MQ=255) tGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCGGGCCGCCGAGCAGtt < 7:228943/145‑1 (MQ=255) tGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGtt > 8:228943/1‑145 (MQ=255) ttGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCa > 4:260184/1‑149 (MQ=255) gCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTg > 2:218926/1‑149 (MQ=255) cccAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTgg < 8:227245/149‑1 (MQ=255) ccAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACAt < 2:28816/117‑1 (MQ=255) ccAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACAt > 1:28816/1‑117 (MQ=255) gcCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGc > 8:130651‑M2/3‑147 (MQ=255) | CCCGGCGGCCAAGGCCTTCAGTGATGCCTTGGGTGAAGGCTCGCGCATGTTGCTGCGGGTGCTGCTGATCACCAACCTGCTGACCGCAATGTTCCTGATCGCCATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGC > NC_002947/1964415‑1964706 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |