New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2881029	44 (0.900)	3 (0.070)	3/246	NT	7.4%	coding (871/1176 nt)	PP_2535	transport protein
	?	NC_002947	= 2881061	34 (0.740)					coding (903/1176 nt)	PP_2535	transport protein

GGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCA  >  NC_002947/2880915‑2881199                                                                                                                                                   |                                                                                                                                           ggCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTg                                                                                                                                           >  7:176391‑M2/1‑147 (MQ=255)  gCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGTCCGCCTTGGCGATCCTGGTCTGGGGTgcg                                                                                                                                         >  8:15196‑M2/1‑146 (MQ=255)       gtgtGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccag                                                                                                                                    <  4:60523‑M2/149‑9 (MQ=255)            gggTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccag                                                                                                                                    <  6:221380‑M2/144‑9 (MQ=255)            gggTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccag                                                                                                                                    >  5:221380‑M2/1‑136 (MQ=255)                 gCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCAGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTg                                                                                                                          <  7:1345/149‑1 (MQ=255)                            gACCGGTCGTTCGATCGCACTGTTCTGCTGTCACTGGCTGGGGTGATTGCCGTGGTGCTGGTGTTTCCGCTGGTACTTGACTGGCCGGTGCCGACCGCCTTGGCGTTCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCt                                                                                                               <  3:208150/149‑1 (MQ=255)                               cGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGc                                                                                                             >  2:281561/1‑148 (MQ=255)                                          tcgCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCa                                                                                                 >  1:152618/1‑149 (MQ=255)                                            gCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATg                                                                                               <  3:165465/149‑1 (MQ=255)                                             cACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATgg                                                                                              <  3:60523/149‑1 (MQ=255)                                                    aTCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                                                       >  4:293764/1‑149 (MQ=255)                                                     tCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                                                       <  3:293764/148‑1 (MQ=255)                                                       cTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGcc                                                                                      >  2:206704/1‑147 (MQ=255)                                                          tCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAgg                                                                                  <  1:281561/148‑1 (MQ=255)                                                            aCTGGCTGGGCTGATTCCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCAGGGAAGCGGCCAAGGATg                                                                               >  8:288612/1‑149 (MQ=255)                                                                gctgggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTGGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGccc                                                                            <  2:216811/148‑1 (MQ=255)                                                                    ggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGACCCCAAc                                                                       >  5:79690/1‑149 (MQ=255)                                                                         aTTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCTCCCAACCTgg                                                                   <  4:174249/148‑1 (MQ=255)                                                                         aTTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGc                                                                  >  7:262758/1‑149 (MQ=255)                                                                             ccGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCctct                                                              >  6:168134/1‑149 (MQ=255)                                                                              cGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTg                                                             >  2:281666/1‑149 (MQ=255)                                                                              cGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTg                                                             >  3:53162/1‑149 (MQ=255)                                                                               gTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGc                                                            <  1:281666/149‑1 (MQ=255)                                                                                   tgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCgg                                                                                                     <  5:248762/104‑1 (MQ=255)                                                                                   tgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCgg                                                                                                     >  6:248762/1‑104 (MQ=255)                                                                                      tgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGaa                                                      >  1:113496/1‑148 (MQ=255)                                                                                             tCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGgc                                               <  6:79690/148‑1 (MQ=255)                                                                                                gCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGt                                           <  5:168134/149‑1 (MQ=255)                                                                                                          gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATgg                                                                                              >  6:6718/1‑88 (MQ=255)                                                                                                          gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATgg                                                                                              <  5:6718/88‑1 (MQ=255)                                                                                                           actggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccagtccagtaccagcggaaacaccagcagcacggcaatcagcccagccagtgacaggatcagagtgcgatcgatcgagcggtccgccgcctt                                           <  7:66806‑M2/138‑98 (MQ=255)                                                                                                           actggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccagtccagtaccagcggaaacaccagcagcacggcaatcagcccagccagtgacaggatcagagtgcgatcgatcgagcggtccgccgcctt                                           >  8:66806‑M2/1‑41 (MQ=255)                                                                                                             tggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTgcggccagtccagtaccagcggaaacaccagcagcacggcaatcagcccagccagtgacaggatcagagtgcgatcgatcgagcggtccgccgccttgccaccccacacg                              <  1:47824‑M2/149‑111 (MQ=255)                                                                                                                cagCTGCCGACCGCGTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCATGGAGCCGCCGCAGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCAAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCACCCTGGGCAATGc                           >  2:190534/3‑149 (MQ=255)                                                                                                                           cGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTgcgg                <  1:206704/149‑1 (MQ=255)                                                                                                                            gCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGa                         <  4:158626/139‑1 (MQ=255)                                                                                                                            gCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGa                         >  3:158626/1‑139 (MQ=255)                                                                                                                                       ccTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                                                        >  6:281409/1‑97 (MQ=255)                                                                                                                                       ccTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                                                        <  5:281409/97‑1 (MQ=255)                                                                                                                                         tGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGgcggcg    >  4:193872/1‑147 (MQ=255)                                                                                                                                         tGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACATGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTCCGGCGCTGGGCGGCGCa  >  8:218347/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                           GGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCA  >  NC_002947/2880915‑2881199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.