New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4035906	60 (1.230)	4 (0.080)	4/254	NT	6.5%	coding (957/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 4035965	56 (1.180)					coding (1016/2145 nt)	PP_3557	methyl‑accepting chemotaxis transducer

CCCGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCGCGGCGTTACCCGGCC  >  NC_002947/4035819‑4036112                                                                                                                                                   |                                                                                                                                                    cccGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcg                                                                                                                                                   <  1:76606‑M2/149‑3 (MQ=255)  ccGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgc                                                                                                                                                  >  2:76606‑M2/1‑146 (MQ=255)  ccGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgc                                                                                                                                                  <  5:63546‑M2/149‑4 (MQ=255)  ccGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgc                                                                                                                                                  >  6:277017‑M2/1‑146 (MQ=255)  ccGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgc                                                                                                                                                  >  6:63546‑M2/1‑146 (MQ=255)    gACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgcc                                                                                                                                                 <  1:108103‑M2/148‑5 (MQ=255)    gACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGccc                                                                                                                                                <  3:141264/149‑1 (MQ=255)     aCCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCt                                                                                                                                               >  3:7725/1‑149 (MQ=255)       cAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGa                                                                                                                                             <  4:7725/149‑1 (MQ=255)           ggCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCgg                                                                                                                                         >  5:9947/1‑149 (MQ=255)            gcgcCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCggg                                                                                                                                        <  6:248078/149‑1 (MQ=255)            gcgcCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCggg                                                                                                                                        >  5:248078/1‑149 (MQ=255)            gcgcCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCggg                                                                                                                                        <  3:173981/149‑1 (MQ=255)                 gAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGggccggc                                                                                                                                   <  4:64656/149‑1 (MQ=255)                  aGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGggccggcc                                                                                                                                  <  8:40691/149‑1 (MQ=255)                       gTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGaaa                                                                                                                              <  6:50386/148‑1 (MQ=255)                            cAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTg                                                                                                                         >  1:214551/1‑148 (MQ=255)                             aaGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGTGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGaa                                                                                                                       <  3:29978/149‑1 (MQ=255)                              aGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAg                                                                                                                      <  5:201533/149‑1 (MQ=255)                               gCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAg                                                                                                                      >  4:230410/1‑148 (MQ=255)                               gCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGc                                                                                                                     <  3:260488/149‑1 (MQ=255)                                cTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCa                                                                                                                    <  7:222284/149‑1 (MQ=255)                                  ggCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGCCCGGGCCGGCCGAAACCCTGAAGCAg                                                                                                                   >  3:82078/1‑148 (MQ=255)                                   gCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAgg                                                                                                                  <  1:66745/148‑1 (MQ=255)                                          gCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGa                                                                                                           <  4:82078/148‑1 (MQ=255)                                               cTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCt                                                                                                     <  2:163468/149‑1 (MQ=255)                                                  accaccCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCa                                                                                                   <  5:19300/148‑1 (MQ=255)                                                   ccaccCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCaa                                                                                                  >  2:228483/1‑148 (MQ=255)                                                    caccCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATa                                                                                                >  6:91299/1‑149 (MQ=255)                                                     accCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATAc                                                                                               <  3:230410/149‑1 (MQ=255)                                                       ccTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCa                                                                                             <  1:228483/149‑1 (MQ=255)                                                       ccTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCATGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATAc                                                                                               >  7:34365/1‑147 (MQ=255)                                                        cTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAg                                                                                            >  6:281858/1‑149 (MQ=255)                                                                 cGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCtt                                                                                   >  6:130780/1‑149 (MQ=255)                                                                      gcgcTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCGGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTgg                                                                              <  4:157854/149‑1 (MQ=255)                                                                        gcTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGaa                                                                            <  6:9947/149‑1 (MQ=255)                                                                          ttGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACt                                                                          >  2:177788/1‑149 (MQ=255)                                                                            gAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACt                                                                          >  2:186254/1‑147 (MQ=255)                                                                                 tGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgccagcaccttcaagcgctgccggtcgtggagggtggtcagcttgccatcggccagcttgcgcaccagctcggcgcctttg                                                                   <  8:219538‑M2/149‑83 (MQ=255)                                                                                  gCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTg                                                                                                            <  7:20487/107‑1 (MQ=255)                                                                                  gCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTg                                                                                                            >  8:20487/1‑107 (MQ=255)                                                                                    tGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgccagcaccttcaagcgctgccggtcgtggagggtggtcagcttgccatcggccagcttgcgcaccagctcggcgcctttggtc                                                                <  6:226811‑M2/149‑86 (MQ=255)                                                                                      gcggcATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGATCTGAgccttggcct                                                              <  8:34365/149‑1 (MQ=255)                                                                                      gcggcATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAgcctgggcct                                                              >  7:171858/1‑149 (MQ=255)                                                                                      gcggcATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAgcctgggcct                                                              >  4:285205/1‑149 (MQ=255)                                                                                       cggcATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAgcctgggcctg                                                             <  5:281858/149‑1 (MQ=255)                                                                                                        ccGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGgc                                                           >  7:120290/1‑134 (MQ=255)                                                                                                        ccGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGgc                                                           <  8:120290/134‑1 (MQ=255)                                                                                                         cGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGc                                           >  2:238353/1‑149 (MQ=255)                                                                                                         cGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGc                                           >  2:305230/1‑149 (MQ=255)                                                                                                           gACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAAcgccagcaccttcaagcgctgccggtcgtggagggtggtcagcttgccatcggccagcttgcgcaccagctcggcgcctttggtcgggtctacctggtcgaagcgctg                                         >  7:219538‑M2/1‑41 (MQ=255)                                                                                                            aCGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctg                                        <  2:108103/149‑1 (MQ=255)                                                                                                                ccAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGCAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctgctgc                                    >  7:255279/1‑149 (MQ=255)                                                                                                                ccAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctgctgc                                    >  2:154602/1‑149 (MQ=255)                                                                                                                ccAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctgctgc                                    <  3:285205/149‑1 (MQ=255)                                                                                                                ccAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctgctgc                                    >  8:86549/1‑149 (MQ=255)                                                                                                                  aGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCctgctgctg                                  >  7:224451/1‑149 (MQ=255)                                                                                                                       tGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATg                             <  8:224451/149‑1 (MQ=255)                                                                                                                       tGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATg                             >  6:240349/1‑149 (MQ=255)                                                                                                                            cGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGa                        <  5:240349/149‑1 (MQ=255)                                                                                                                              tgctgcTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATg                      <  5:247131/149‑1 (MQ=255)                                                                                                                                   ctgGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCcg                 >  3:139211/1‑149 (MQ=255)                                                                                                                                   ctgGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCAcg                 >  3:124069/1‑149 (MQ=255)                                                                                                                                    tgGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCcgc                >  3:71527/1‑149 (MQ=255)                                                                                                                                      gATGTGCCTGAAAAcgccagcaccttcaagcgctgccggtcgtggagggtggtcagcttgccatcggccagcttgcgcaccagctcggcgcctttggtcgggtctacctggtcgaagcgctgggccagcttgctggcatcggcgctgta              >  5:226811‑M2/1‑14 (MQ=255)                                                                                                                                      gATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCcgcg               <  1:177788/148‑1 (MQ=255)                                                                                                                                       aTGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCgcggc             <  5:130780/149‑1 (MQ=255)                                                                                                                                          tgCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCGCGGCGtt          <  1:186254/149‑1 (MQ=255)                                                                                                                                            ccGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCGCGGCGTTAc        >  3:68895/1‑149 (MQ=255)                                                                                                                                                  aaCGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAgcctgg                                                                  <  1:105636/85‑1 (MQ=255)                                                                                                                                                  aaCGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCGCGGCGTTACCCGGcc  <  1:305230/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CCCGACCAAAGGCGCCGAGCTGGTGCGCAAGCTGGCCGATGGCAAGCTGACCACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCGGCACCTTGCTGGAACTGAGCCTGGGCCTGGCCGCCGCCATTGTCGGCCTGCTGCTGGTATGGCTGATGGCCCGCGGCGTTACCCGGCC  >  NC_002947/4035819‑4036112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.